| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691846
Identifier: 213691846
GI number: 213691846
Start: 1128452
End: 1129108
Strand: Reverse
Name: 213691846
Synonym: Blon_0955
Alternate gene names: NA
Gene position: 1129108-1128452 (Counterclockwise)
Preceding gene: 213691848
Following gene: 213691844
Centisome position: 39.86
GC content: 63.17
Gene sequence:
>657_bases ATGACTGAGAACCAGAATAGCAATGCCGACGGAAAGCGGCCAACCCCCACGCCGGGCAACGGACAGGATTACGGCATTTC GCCCCGGACGCCCGGAGACGGCGACGACGGGTCGCATGGCACGAACGATCTGGATTCGGCGTGGGCCGCATTCGAAGCCG AACATCAGGCCGACCTGCACGACGTGGCTTCCTCGCGCCAGGCCAGAAAGTTCGAGAAGCAGGCCAAAAAACGCGAGAAG GAGGCCCTGCTTTCCGTGAACGATCTGGACATCGGATCGTTCACCGATGACGTCCGTCCCGGCCGCGGTGGCAGACGTTC TGGCCCGCGCGATTTCACCGGTTCCAGCTGGCTGGACGTCGACAACGGCATGGACGCGCATGACGATGGCGGCTTCACTC CCCCGAACCCCGACCTCGGGCCGGTCAGGACGTCCACGATGCTGCTGGTGACGCTGCTCGTCGTCGGTCTCGTGGGCGAG ATGGTGATGGTGCTCGTTCCCGGTTTGAATTCGATTCCGCTATTGGGCCCGTTGCTCAACATCCTCTTCGGATTGGGCGT CCTTCTCGGCTTGGGTGGTCTGGTGGCGGGAATCCTCAACCGCAAAGACCACCCAGGGAACCGGGGCGGATACTACGACG ACGGCGCACGGGTCTAA
Upstream 100 bases:
>100_bases CAATAGGGCCGAGACCTTTGACGAAGAACCAGTAGAGCACTTGGCATTCCTCCCGCAGACGAACTAGCCATTGGCCGGTC GCCTGATTAGAGTGACAGTT
Downstream 100 bases:
>100_bases CGCTTGGACTGGGCGGTTTCGATCCACTTGTTGAACAGGGCTTCAGCCTTGCCGGAGTCGACAGCATCCTCGGCCAGTTT GTAGGCCTCGGCGAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTENQNSNADGKRPTPTPGNGQDYGISPRTPGDGDDGSHGTNDLDSAWAAFEAEHQADLHDVASSRQARKFEKQAKKREK EALLSVNDLDIGSFTDDVRPGRGGRRSGPRDFTGSSWLDVDNGMDAHDDGGFTPPNPDLGPVRTSTMLLVTLLVVGLVGE MVMVLVPGLNSIPLLGPLLNILFGLGVLLGLGGLVAGILNRKDHPGNRGGYYDDGARV
Sequences:
>Translated_218_residues MTENQNSNADGKRPTPTPGNGQDYGISPRTPGDGDDGSHGTNDLDSAWAAFEAEHQADLHDVASSRQARKFEKQAKKREK EALLSVNDLDIGSFTDDVRPGRGGRRSGPRDFTGSSWLDVDNGMDAHDDGGFTPPNPDLGPVRTSTMLLVTLLVVGLVGE MVMVLVPGLNSIPLLGPLLNILFGLGVLLGLGGLVAGILNRKDHPGNRGGYYDDGARV >Mature_217_residues TENQNSNADGKRPTPTPGNGQDYGISPRTPGDGDDGSHGTNDLDSAWAAFEAEHQADLHDVASSRQARKFEKQAKKREKE ALLSVNDLDIGSFTDDVRPGRGGRRSGPRDFTGSSWLDVDNGMDAHDDGGFTPPNPDLGPVRTSTMLLVTLLVVGLVGEM VMVLVPGLNSIPLLGPLLNILFGLGVLLGLGGLVAGILNRKDHPGNRGGYYDDGARV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23082; Mature: 22951
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENQNSNADGKRPTPTPGNGQDYGISPRTPGDGDDGSHGTNDLDSAWAAFEAEHQADLH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DVASSRQARKFEKQAKKREKEALLSVNDLDIGSFTDDVRPGRGGRRSGPRDFTGSSWLDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC DNGMDAHDDGGFTPPNPDLGPVRTSTMLLVTLLVVGLVGEMVMVLVPGLNSIPLLGPLLN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILFGLGVLLGLGGLVAGILNRKDHPGNRGGYYDDGARV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TENQNSNADGKRPTPTPGNGQDYGISPRTPGDGDDGSHGTNDLDSAWAAFEAEHQADLH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DVASSRQARKFEKQAKKREKEALLSVNDLDIGSFTDDVRPGRGGRRSGPRDFTGSSWLDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC DNGMDAHDDGGFTPPNPDLGPVRTSTMLLVTLLVVGLVGEMVMVLVPGLNSIPLLGPLLN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILFGLGVLLGLGGLVAGILNRKDHPGNRGGYYDDGARV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA