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The map label for this gene is lrtA [H]

Identifier: 213691842

GI number: 213691842

Start: 1122708

End: 1123370

Strand: Direct

Name: lrtA [H]

Synonym: Blon_0951

Alternate gene names: 213691842

Gene position: 1122708-1123370 (Clockwise)

Preceding gene: 213691841

Following gene: 213691843

Centisome position: 39.63

GC content: 60.94

Gene sequence:

>663_bases
ATGGAAATCGTCGTTACCGGACGCCACACGCAGGTCAAGCAAAGGTTCCGTGATGTGGTCGAGACCAAGATGAATCGTGT
GACCGCTATCGCCCCGGATGCTCAGCGCGCGCAGATTGTGCTGACCCATGAGGGCAACCCGCGTCAGGCCGATACCGCCA
AGCGCGTGGAAATCACCGTTATCGCCGGACGTACCGTGGTGCGTGCGGAGGCTTCCAGCACCGATGAATTCAGCGCGCTG
GACATGGCGCTGGATAAGTTGACGCTGCGTCTGCGTCGTACTCGTGACCGTCGCAAGGATCACCGTCGTGGTTACGCGAA
CCCGGTCCCGGTGGATCTGGGTGTTATCGCCCCGGAGACCGAGCCGGAGGAGTCGGAGGAAGAGCCGAACAACAGCCCGC
AGGCTGCGGTCGCCTCCGATCTTGGCCCTGGCGAATCCGTGGAGGTCCAGGTTGGGGATACGCCGATTGTCATCCGTCGC
AAGCTGCACATCGCCGAGCCTATGAGCATCGACGAGGCGCTGTACGAGATGGAACTGATCGGACACGACTTCTTCCTGTT
CGTGAACAAGGAGACCGGACGCCCGTCCGTCGTCTACCACCGTCACGGTTGGAGCTACGGCGTGTTCGAAATCGATACTC
CGGAGAATGTCAAGAAGGCCTGA

Upstream 100 bases:

>100_bases
TTCACCCATTGTTCGTCTACAATGAAACATACCCGGTCGGTGATGATGCCGTTCGGAACACATATAGCGGGTTACACCGC
TTGAGTTAGAGGAGGTCAAC

Downstream 100 bases:

>100_bases
AGGTAAGGCCTGCTGACACGATCAGCTGATACCGCATGGACCGCTTCCAATATGGAGGCGGTCCATTTTTTCGTAAGAAG
GTCGAAAAAATCGACTGCTG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEIVVTGRHTQVKQRFRDVVETKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITVIAGRTVVRAEASSTDEFSAL
DMALDKLTLRLRRTRDRRKDHRRGYANPVPVDLGVIAPETEPEESEEEPNNSPQAAVASDLGPGESVEVQVGDTPIVIRR
KLHIAEPMSIDEALYEMELIGHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKKA

Sequences:

>Translated_220_residues
MEIVVTGRHTQVKQRFRDVVETKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITVIAGRTVVRAEASSTDEFSAL
DMALDKLTLRLRRTRDRRKDHRRGYANPVPVDLGVIAPETEPEESEEEPNNSPQAAVASDLGPGESVEVQVGDTPIVIRR
KLHIAEPMSIDEALYEMELIGHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKKA
>Mature_220_residues
MEIVVTGRHTQVKQRFRDVVETKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITVIAGRTVVRAEASSTDEFSAL
DMALDKLTLRLRRTRDRRKDHRRGYANPVPVDLGVIAPETEPEESEEEPNNSPQAAVASDLGPGESVEVQVGDTPIVIRR
KLHIAEPMSIDEALYEMELIGHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKKA

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 24717; Mature: 24717

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVVTGRHTQVKQRFRDVVETKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITV
CEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEE
IAGRTVVRAEASSTDEFSALDMALDKLTLRLRRTRDRRKDHRRGYANPVPVDLGVIAPET
EECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
EPEESEEEPNNSPQAAVASDLGPGESVEVQVGDTPIVIRRKLHIAEPMSIDEALYEMELI
CCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHC
GHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKKA
CCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MEIVVTGRHTQVKQRFRDVVETKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITV
CEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEE
IAGRTVVRAEASSTDEFSALDMALDKLTLRLRRTRDRRKDHRRGYANPVPVDLGVIAPET
EECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
EPEESEEEPNNSPQAAVASDLGPGESVEVQVGDTPIVIRRKLHIAEPMSIDEALYEMELI
CCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHC
GHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKKA
CCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063707 [H]