Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691841

Identifier: 213691841

GI number: 213691841

Start: 1121256

End: 1121849

Strand: Direct

Name: 213691841

Synonym: Blon_0950

Alternate gene names: NA

Gene position: 1121256-1121849 (Clockwise)

Preceding gene: 213691840

Following gene: 213691842

Centisome position: 39.58

GC content: 60.77

Gene sequence:

>594_bases
ATGATTAGTGCCGAAGCGTTCTTGCGGCGCAATCCTGTTGCGTCGCAAGACATGCCCATTGCCGAGCAGCGTGTTCAGTC
GAAACCGTCGGGACGTTTTTCTCGACGGGGGAGAGGCGCTGCCGTTGTCGAAGATCCCAATGATTTGGACGCTTGCCGCG
AGGCTGCCTTGCGTTTGCTGGACGCGGCCCCGCGTGCATCCGGCGCGTTACGCGAACGATTGCTTGCCAAAGGGTACGGC
GAGGCGATCGTGGACGAGGTCATCGAACGGCTGATTCGCGTGCAACTGATTGACGACCGCGCTTATGCCGAATCGGCCGT
ACGCTATTGTGCCGGTCGCATGATGGGCCGTCGTGGTGCGGTCCTGGAACTTGCTCGCAAAGGCGTGGACCGCAAACTGG
CTGAACAGGTGTGTGGCGAAGCTGAGCAAAATGGCATCTTTGAAGATGCCGCATGGGAATTGGGCCGCCAGATAGCCCGC
AAAACCCATGGCCTCGATCATCAGGTCCGTCAGCGTCGGTTTTGGTCCGCAGGCGGCCGCAAAGGACACAGCCCCGAAAC
CCTCCGCCGAGTCGCCGCCGAATTGTTGGCGTAG

Upstream 100 bases:

>100_bases
GCGAGGCCGCTGCGGCCGACGTGGCCAAGGACAGCAAGGCCGCAGCGGCGTCTGCTGCCAAAACGACCCGTGCCAAGGCC
GGCACGGCGAAGGCCTGAAC

Downstream 100 bases:

>100_bases
CCAAGAAAAAAAAATGAGACCTCTCATACCCCGGGTTCTGTCGTGCCGTGCGCGAACGCGCAGCACGGATGGCCATCCAT
CTCGACCTGACGTTACCGCC

Product: regulatory protein RecX

Products: NA

Alternate protein names: RecX-Like Protein; RecX RecX-Like Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MISAEAFLRRNPVASQDMPIAEQRVQSKPSGRFSRRGRGAAVVEDPNDLDACREAALRLLDAAPRASGALRERLLAKGYG
EAIVDEVIERLIRVQLIDDRAYAESAVRYCAGRMMGRRGAVLELARKGVDRKLAEQVCGEAEQNGIFEDAAWELGRQIAR
KTHGLDHQVRQRRFWSAGGRKGHSPETLRRVAAELLA

Sequences:

>Translated_197_residues
MISAEAFLRRNPVASQDMPIAEQRVQSKPSGRFSRRGRGAAVVEDPNDLDACREAALRLLDAAPRASGALRERLLAKGYG
EAIVDEVIERLIRVQLIDDRAYAESAVRYCAGRMMGRRGAVLELARKGVDRKLAEQVCGEAEQNGIFEDAAWELGRQIAR
KTHGLDHQVRQRRFWSAGGRKGHSPETLRRVAAELLA
>Mature_197_residues
MISAEAFLRRNPVASQDMPIAEQRVQSKPSGRFSRRGRGAAVVEDPNDLDACREAALRLLDAAPRASGALRERLLAKGYG
EAIVDEVIERLIRVQLIDDRAYAESAVRYCAGRMMGRRGAVLELARKGVDRKLAEQVCGEAEQNGIFEDAAWELGRQIAR
KTHGLDHQVRQRRFWSAGGRKGHSPETLRRVAAELLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21871; Mature: 21871

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAEAFLRRNPVASQDMPIAEQRVQSKPSGRFSRRGRGAAVVEDPNDLDACREAALRLL
CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHH
DAAPRASGALRERLLAKGYGEAIVDEVIERLIRVQLIDDRAYAESAVRYCAGRMMGRRGA
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLELARKGVDRKLAEQVCGEAEQNGIFEDAAWELGRQIARKTHGLDHQVRQRRFWSAGGR
HHHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
KGHSPETLRRVAAELLA
CCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MISAEAFLRRNPVASQDMPIAEQRVQSKPSGRFSRRGRGAAVVEDPNDLDACREAALRLL
CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHH
DAAPRASGALRERLLAKGYGEAIVDEVIERLIRVQLIDDRAYAESAVRYCAGRMMGRRGA
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLELARKGVDRKLAEQVCGEAEQNGIFEDAAWELGRQIARKTHGLDHQVRQRRFWSAGGR
HHHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
KGHSPETLRRVAAELLA
CCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA