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The map label for this gene is recA [H]

Identifier: 213691840

GI number: 213691840

Start: 1119997

End: 1121253

Strand: Direct

Name: recA [H]

Synonym: Blon_0949

Alternate gene names: 213691840

Gene position: 1119997-1121253 (Clockwise)

Preceding gene: 213691839

Following gene: 213691841

Centisome position: 39.54

GC content: 62.53

Gene sequence:

>1257_bases
ATGGCATGTCCGTCATACGGTGGAGGCATCCGATTCGCACACGACTTCGACAAGGAGAAGATCATGGCACTTGAGACCAA
GCCGGCCAAGGACCCGGCAGCCGAGGACAAGCACGAGCTCGATCCCAAGCGCAAGGCGGCGCTGGACACCGCGCTGGCGC
AGGTCGAGAAGAGCTTTGGCAAAGGTTCCGCAATGCGACTGGGCGACCAGCCCGAGCAGAACGTCGAGGTGATTCCCACC
GGTTCGTTGGCCCTCGATATGGCGCTCGGCATCGGCGGCCTGCCCAAGGGCCGCATCGTGGAGATCTACGGCCCCGAATC
ATCCGGTAAGACCACGCTCGCATTGCATGTGGTGGCCAATGCCCAGAAGAAGGGCGGCGTGGCGGCCTACATCGATGCCG
AACACGCACTCGACCCGGCCTACGCCCGCAAGCTCGGCGTGGACACCGACTCGCTCATCGTCTCCCAGCCGGATAACGGC
GAGCAGGCCCTCGAAATCGCCGACATGCTGATTCGCTCCGGTGCACTTGACGTCATTGTCATCGACTCGGTCGCCGCCCT
AGTGCCGAAGGCCGAAATCGAAGGCGAAATGGGAGACAGCCATGTTGGTTTGCAGGCCCGACTCATGAGTCAGGCGCTGC
GCAAGATGACCGGCGCGTTGGCTCAGGCCGGCACCACCGCCATCTTCATCAACCAGCTGCGTGAGAAGATCGGCGTGTTC
TTCGGCAACCCTGAAACCACCACCGGTGGTAAAGCTCTGAAGTTCTACGCCTCCGTGCGTCTCGACATCCGCCGCATCCA
GACCTTGAAGAACGGCGACGAAGCGGTGGGCAACCGCACGCGCGTCAAGGTGGTCAAGAACAAGATGGCCCCGCCTTTCA
AGTCCGCCGAATTCGACATGCTCTACGGTGAAGGCATTTCCCGTGAGGGCTCGGTGATCGACATGGCCCAGCAGGTTGGC
GTGGTCAAGAAGTCCGGTTCGTGGTTCACCTATGAGGGTGATCAGCTCGGTCAGGGACGAGAGAAGGTCCGTCAGTTCCT
TAAGGACAACCCGGCCATCACCGAGGAGATTGAGAACAAGGTCAAGGCCGAGTTCGGTCTGATCGGTTCCGCCGATCAGT
TCGCGGAAGATGGCGAAGCCGCAGCAGCGGCCGCCGTCAGCGAGGCCGCTGCGGCCGACGTGGCCAAGGACAGCAAGGCC
GCAGCGGCGTCTGCTGCCAAAACGACCCGTGCCAAGGCCGGCACGGCGAAGGCCTGA

Upstream 100 bases:

>100_bases
TTGCCATCCGCCATAAGCCTTATCGCAGTAGGGCTTAAGGAGGCCAGGCGGCCGAGCTTGGGCAAGCTGGAACCACAATG
GTTGGTCTGGATTGCCTCGC

Downstream 100 bases:

>100_bases
ACATGATTAGTGCCGAAGCGTTCTTGCGGCGCAATCCTGTTGCGTCGCAAGACATGCCCATTGCCGAGCAGCGTGTTCAG
TCGAAACCGTCGGGACGTTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MACPSYGGGIRFAHDFDKEKIMALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPT
GSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNG
EQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVF
FGNPETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVG
VVKKSGSWFTYEGDQLGQGREKVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKA
AAASAAKTTRAKAGTAKA

Sequences:

>Translated_418_residues
MACPSYGGGIRFAHDFDKEKIMALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPT
GSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNG
EQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVF
FGNPETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVG
VVKKSGSWFTYEGDQLGQGREKVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKA
AAASAAKTTRAKAGTAKA
>Mature_417_residues
ACPSYGGGIRFAHDFDKEKIMALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTG
SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE
QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFF
GNPETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGV
VKKSGSWFTYEGDQLGQGREKVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKAA
AASAAKTTRAKAGTAKA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=323, Percent_Identity=65.015479876161, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 44116; Mature: 43984

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACPSYGGGIRFAHDFDKEKIMALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFG
CCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHC
KGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVAN
CCCEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEC
AQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIV
CCCCCCEEEEEEHHHCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEE
IDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVF
ECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEE
FGNPETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDM
ECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHHHHCCCCCCCCCEEE
LYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGREKVRQFLKDNPAITEEIENK
EECCCCCCCCCHHHHHHHCCCEEECCCEEEECCHHHCCCHHHHHHHHHCCCCHHHHHHHH
VKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKAAAASAAKTTRAKAGTAKA
HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ACPSYGGGIRFAHDFDKEKIMALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFG
CCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHC
KGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVAN
CCCEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEC
AQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIV
CCCCCCEEEEEEHHHCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEE
IDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVF
ECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEE
FGNPETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDM
ECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHHHHCCCCCCCCCEEE
LYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGREKVRQFLKDNPAITEEIENK
EECCCCCCCCCHHHHHHHCCCEEECCCEEEECCHHHCCCHHHHHHHHHCCCCHHHHHHHH
VKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKAAAASAAKTTRAKAGTAKA
HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]