Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691839

Identifier: 213691839

GI number: 213691839

Start: 1119460

End: 1119759

Strand: Direct

Name: 213691839

Synonym: Blon_0948

Alternate gene names: NA

Gene position: 1119460-1119759 (Clockwise)

Preceding gene: 213691838

Following gene: 213691840

Centisome position: 39.52

GC content: 60.67

Gene sequence:

>300_bases
GTGAACCCGTATCGCTTGTGGCGATGCGGGTTTTGCTGTCCTGCGGGTGGTGGCACACTGGCGTGTATGCGTGAACGGGA
ATTCTGGGAATTACTTGAAGAGGTGTTCGGTCGGACCTACGGTCGTTCGCTGTCGCGTGATCAACGGATGCCCAAACTGG
CGAATATGACTGTGGTCGAGGCGTTGGACGCGGGGGAGGAGCCACGCGTGGTCTGGAATGTGCTCTGCGACCAGATGGAG
GTTCCGGACTCCAAGCGTTGGGGCCACGATCATAACGCGCCGCCCATGCCCGCCGTCTGA

Upstream 100 bases:

>100_bases
CCACTTCGCGCATGCTGCGCATGGTGGCTGATTATCTCGACTCGGTCGAGGGCTGATCGGTTGGCGGTGTGAAGCCGCGT
ACAGTAGTCTATGTCTAGCT

Downstream 100 bases:

>100_bases
CACTGCGGGATTACGGAGTCGCTGAATCGTGAAATTGGCGATTTCGGCGTGTTGCACGCCAAATTCGAACAGATGTTCGT
GTGTGTGGTTATAGTTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNPYRLWRCGFCCPAGGGTLACMREREFWELLEEVFGRTYGRSLSRDQRMPKLANMTVVEALDAGEEPRVVWNVLCDQME
VPDSKRWGHDHNAPPMPAV

Sequences:

>Translated_99_residues
MNPYRLWRCGFCCPAGGGTLACMREREFWELLEEVFGRTYGRSLSRDQRMPKLANMTVVEALDAGEEPRVVWNVLCDQME
VPDSKRWGHDHNAPPMPAV
>Mature_99_residues
MNPYRLWRCGFCCPAGGGTLACMREREFWELLEEVFGRTYGRSLSRDQRMPKLANMTVVEALDAGEEPRVVWNVLCDQME
VPDSKRWGHDHNAPPMPAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11370; Mature: 11370

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYRLWRCGFCCPAGGGTLACMREREFWELLEEVFGRTYGRSLSRDQRMPKLANMTVVE
CCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
ALDAGEEPRVVWNVLCDQMEVPDSKRWGHDHNAPPMPAV
HHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPYRLWRCGFCCPAGGGTLACMREREFWELLEEVFGRTYGRSLSRDQRMPKLANMTVVE
CCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
ALDAGEEPRVVWNVLCDQMEVPDSKRWGHDHNAPPMPAV
HHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA