| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691822
Identifier: 213691822
GI number: 213691822
Start: 1097763
End: 1098458
Strand: Direct
Name: 213691822
Synonym: Blon_0930
Alternate gene names: NA
Gene position: 1097763-1098458 (Clockwise)
Preceding gene: 213691821
Following gene: 213691823
Centisome position: 38.75
GC content: 57.9
Gene sequence:
>696_bases ATGACACGACGAATTCTCGGATTGCTGGCCTGCATGGCGGCTGTGTTGTCCCTAGCTGCCTGCACGCCGGCCGGTAGGGC GGTCGGCGATACCCAAGACAGCATGCCGGAAGTCGCCCACGATTCCACACATCCCACGGATGTCACAGTCGGCTTTGTGG GCTCGACTGATACCGCCGCAGACAAGTCCGCCATCAATGCGCTGTCTGATGACAAACTCAATGTCTACTATGCCTCGCTC GAAACATCCGCGAGCTCGGCAAACGCAACTGATGGCGTATCCGGTGAAACCGAATCTTCTGACGCCGGCAATACCAACGA AGACGGTGCCGATAGTACGGATGCTCATACTGGCGTCGACAAGAATGCGGCCACCGCACAGCAGGGTGTTGCCGATTTCG TGGCTCGCGCGGTCAAAATCGTGATTATCAGCGGCATCGACGTTACCGACGCCAACCGGGAGAGCTGGAACCAGACGTTG ACCAATGCGCGTGAAGCCGGTATTCCAGTCGCTTTCATTGATCCAAAGCATGCGCCCGAAGATGGACTGCTGTACGCCGT CATCCTTCACCTCAACACCGGCAGTGCCGATTCTGGCGACACTGCCGATACCAAGCCAATGGCTATTACTGACGCCGTGC TCACCATCACGCGCGACGAACCCCACGAACGCGAGATCAAAGTCACCGTCTCCTGA
Upstream 100 bases:
>100_bases GCGAAGGCTACGAACTCAAAGACATCCGTGCCTTTGACATCTACCCGATGACCCACCACGTCGAGACGGTGGCACTGTTT ACCCGCTGACAGGTGAGCAT
Downstream 100 bases:
>100_bases GCCGAATCAGCCCCTTGAAGCTGAGAAAGCACCCTGAATCATCCCTGAGCCTTAGTGGATTGCGAAACAAGACGCGGTAA GCTGGGGAATATGAGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTRRILGLLACMAAVLSLAACTPAGRAVGDTQDSMPEVAHDSTHPTDVTVGFVGSTDTAADKSAINALSDDKLNVYYASL ETSASSANATDGVSGETESSDAGNTNEDGADSTDAHTGVDKNAATAQQGVADFVARAVKIVIISGIDVTDANRESWNQTL TNAREAGIPVAFIDPKHAPEDGLLYAVILHLNTGSADSGDTADTKPMAITDAVLTITRDEPHEREIKVTVS
Sequences:
>Translated_231_residues MTRRILGLLACMAAVLSLAACTPAGRAVGDTQDSMPEVAHDSTHPTDVTVGFVGSTDTAADKSAINALSDDKLNVYYASL ETSASSANATDGVSGETESSDAGNTNEDGADSTDAHTGVDKNAATAQQGVADFVARAVKIVIISGIDVTDANRESWNQTL TNAREAGIPVAFIDPKHAPEDGLLYAVILHLNTGSADSGDTADTKPMAITDAVLTITRDEPHEREIKVTVS >Mature_230_residues TRRILGLLACMAAVLSLAACTPAGRAVGDTQDSMPEVAHDSTHPTDVTVGFVGSTDTAADKSAINALSDDKLNVYYASLE TSASSANATDGVSGETESSDAGNTNEDGADSTDAHTGVDKNAATAQQGVADFVARAVKIVIISGIDVTDANRESWNQTLT NAREAGIPVAFIDPKHAPEDGLLYAVILHLNTGSADSGDTADTKPMAITDAVLTITRDEPHEREIKVTVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23857; Mature: 23726
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRILGLLACMAAVLSLAACTPAGRAVGDTQDSMPEVAHDSTHPTDVTVGFVGSTDTAA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCHH DKSAINALSDDKLNVYYASLETSASSANATDGVSGETESSDAGNTNEDGADSTDAHTGVD HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNAATAQQGVADFVARAVKIVIISGIDVTDANRESWNQTLTNAREAGIPVAFIDPKHAPE CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC DGLLYAVILHLNTGSADSGDTADTKPMAITDAVLTITRDEPHEREIKVTVS CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure TRRILGLLACMAAVLSLAACTPAGRAVGDTQDSMPEVAHDSTHPTDVTVGFVGSTDTAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCHH DKSAINALSDDKLNVYYASLETSASSANATDGVSGETESSDAGNTNEDGADSTDAHTGVD HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNAATAQQGVADFVARAVKIVIISGIDVTDANRESWNQTLTNAREAGIPVAFIDPKHAPE CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC DGLLYAVILHLNTGSADSGDTADTKPMAITDAVLTITRDEPHEREIKVTVS CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA