| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is rpmI
Identifier: 213691795
GI number: 213691795
Start: 1068306
End: 1068500
Strand: Direct
Name: rpmI
Synonym: Blon_0903
Alternate gene names: 213691795
Gene position: 1068306-1068500 (Clockwise)
Preceding gene: 213691794
Following gene: 213691796
Centisome position: 37.71
GC content: 61.54
Gene sequence:
>195_bases ATGCCGAAGATGAAAACTAATTCCGCCGCTTCCAAGCGCGCCAAGATCACCGGCACCGGCAAGGTGAAGCATGTCGGTTC CGCCATGCGCCACAACCTCGAGCACAAGTCCGCTCGCAAGCGCCGTGAACTGTCCGCCGACGATGTGCTGCGCGGCGGCC AGGCCAAGAAGCTGCACCAGCTTCTGCAGAAGTGA
Upstream 100 bases:
>100_bases GCGGCCAAGCAGGAGTCTCAGGCTCAGGCCGCGGCCGACGCGCAGTCCGCGATTTCTCAGAAGACTTCCGACAAGAAGCA AACCAGCAAGGAGGGCAGCA
Downstream 100 bases:
>100_bases ACATAGGGCTTACCCGGAAATAATAAGACTTTAGAAAGCTGAGGAATAGATTATGGCACGTGTCAAGCGCGCAGTGAACG CCCACAAGAAGCGTCGCGTT
Product: 50S ribosomal protein L35
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK
Sequences:
>Translated_64_residues MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK >Mature_63_residues PKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK
Specific function: Unknown
COG id: COG0291
COG function: function code J; Ribosomal protein L35
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L35P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL35_BIFLD (B3DQT3)
Other databases:
- EMBL: CP000605 - RefSeq: YP_001954177.1 - ProteinModelPortal: B3DQT3 - SMR: B3DQT3 - GeneID: 6364103 - GenomeReviews: CP000605_GR - KEGG: blj:BLD_0233 - HOGENOM: HBG734125 - OMA: MMNETTI - ProtClustDB: PRK00172 - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00514 - InterPro: IPR021137 - InterPro: IPR001706 - PRINTS: PR00064 - TIGRFAMs: TIGR00001
Pfam domain/function: PF01632 Ribosomal_L35p
EC number: NA
Molecular weight: Translated: 7116; Mature: 6985
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: PS00936 RIBOSOMAL_L35
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCCHHHHHH LLQK HHHC >Mature Secondary Structure PKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCCHHHHHH LLQK HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA