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The map label for this gene is yurM [H]

Identifier: 213691777

GI number: 213691777

Start: 1045963

End: 1046895

Strand: Direct

Name: yurM [H]

Synonym: Blon_0885

Alternate gene names: 213691777

Gene position: 1045963-1046895 (Clockwise)

Preceding gene: 213691776

Following gene: 213691778

Centisome position: 36.92

GC content: 58.74

Gene sequence:

>933_bases
ATGGCTTATTCATCAGTTTCCGGAAGACCGGCCCACTCCAGGCGCGTGCGTCCGGCGGCCGATCGAGGTTCGGCCCATTC
ATGGACGGCGGGCCGCATGGTTGGCCAGGTGGTGCTGGTAATCGCCGCCTTGGGCATCGCCATCCCCACCCTGTGGGTGT
TCGTGGCTTCGTTCAAGGATAAAAGTGAGTTCTACGGATCACCCTGGACCTGGCCCAAGGGCCTGCACTGGCAGAACTAT
GCGGATGCTTTCGTGGACGCCAAGCTCGGACAGTACTTCGGCACATCGGTGCTGGTCACCGTCATGTCGATGGCCATGGT
GCTGGTGATCGCGCTGCCCTGCTCCTACGTGCTCGCGCGCTTCGATTTTCCGGGCAAGAAGATTCTTAAACTCGCCGTTC
AGGCCGGCCTGTTCATCAACGTGAACTACATCGTCGTGCCGATCTTCCTGATGCTTGTGGACGCCGACAAGCTGCTCTAC
AACATCATGCCGAACGGGTTCTTCGTGAACAACGTGTTCATCCTGGCGCTGGTCTACGCCTCGACGTCGCTGCCATTCAC
CATCTTCCTGCTCCAGGACTTCTTCGCCTCCATTCCGAAGGACTACGAGGAGGCCGCCATGATTGACGGCGCCTCGCAAA
CCAGGATCATGACCCGCATCTTCTTCCCGATGGCCATGCCCGCCATCTCCATGTCGATGCTGTTCAACTTCCTGACCTAC
TGGAACGACTACATCATCTCCATGACCCTCATGACCGGCAACAACCGCACCGTGCAAGTGGGCCTGCTCAACCTCATGCA
GACGCAGAAGGCGGCCACCAACTACGGGCGCCTGTACGCCGGCATGGTGATCGTCATGGTGCCGGTGCTGATCTTCTACG
CCGTCGTGCAGAAGAAACTCCTCGAAACCTCGACCATGGGAGGAATCAAATGA

Upstream 100 bases:

>100_bases
ATCGGCGTGGTGATCTTCCTGTTCAGCTTCATCATGTCGTTGATCGTGAACCGTGCCACCAAGCGCGAAGTGCTGCAATA
CTAAAGGAGGGCGAGATATC

Downstream 100 bases:

>100_bases
GCGACAGGACGAAAAGCGTGATCGCCACGACGGTCAAAGTGACGCTGTATGTCTGTTTCGTGGTGCTGACCATCGTCGGC
GTCGGTCGTGACGGATGGGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MAYSSVSGRPAHSRRVRPAADRGSAHSWTAGRMVGQVVLVIAALGIAIPTLWVFVASFKDKSEFYGSPWTWPKGLHWQNY
ADAFVDAKLGQYFGTSVLVTVMSMAMVLVIALPCSYVLARFDFPGKKILKLAVQAGLFINVNYIVVPIFLMLVDADKLLY
NIMPNGFFVNNVFILALVYASTSLPFTIFLLQDFFASIPKDYEEAAMIDGASQTRIMTRIFFPMAMPAISMSMLFNFLTY
WNDYIISMTLMTGNNRTVQVGLLNLMQTQKAATNYGRLYAGMVIVMVPVLIFYAVVQKKLLETSTMGGIK

Sequences:

>Translated_310_residues
MAYSSVSGRPAHSRRVRPAADRGSAHSWTAGRMVGQVVLVIAALGIAIPTLWVFVASFKDKSEFYGSPWTWPKGLHWQNY
ADAFVDAKLGQYFGTSVLVTVMSMAMVLVIALPCSYVLARFDFPGKKILKLAVQAGLFINVNYIVVPIFLMLVDADKLLY
NIMPNGFFVNNVFILALVYASTSLPFTIFLLQDFFASIPKDYEEAAMIDGASQTRIMTRIFFPMAMPAISMSMLFNFLTY
WNDYIISMTLMTGNNRTVQVGLLNLMQTQKAATNYGRLYAGMVIVMVPVLIFYAVVQKKLLETSTMGGIK
>Mature_309_residues
AYSSVSGRPAHSRRVRPAADRGSAHSWTAGRMVGQVVLVIAALGIAIPTLWVFVASFKDKSEFYGSPWTWPKGLHWQNYA
DAFVDAKLGQYFGTSVLVTVMSMAMVLVIALPCSYVLARFDFPGKKILKLAVQAGLFINVNYIVVPIFLMLVDADKLLYN
IMPNGFFVNNVFILALVYASTSLPFTIFLLQDFFASIPKDYEEAAMIDGASQTRIMTRIFFPMAMPAISMSMLFNFLTYW
NDYIISMTLMTGNNRTVQVGLLNLMQTQKAATNYGRLYAGMVIVMVPVLIFYAVVQKKLLETSTMGGIK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=266, Percent_Identity=27.8195488721804, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1789860, Length=275, Percent_Identity=24, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34514; Mature: 34383

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSSVSGRPAHSRRVRPAADRGSAHSWTAGRMVGQVVLVIAALGIAIPTLWVFVASFKD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSEFYGSPWTWPKGLHWQNYADAFVDAKLGQYFGTSVLVTVMSMAMVLVIALPCSYVLAR
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDFPGKKILKLAVQAGLFINVNYIVVPIFLMLVDADKLLYNIMPNGFFVNNVFILALVYA
CCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
STSLPFTIFLLQDFFASIPKDYEEAAMIDGASQTRIMTRIFFPMAMPAISMSMLFNFLTY
CCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNDYIISMTLMTGNNRTVQVGLLNLMQTQKAATNYGRLYAGMVIVMVPVLIFYAVVQKKL
HHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETSTMGGIK
HHHHHCCCCC
>Mature Secondary Structure 
AYSSVSGRPAHSRRVRPAADRGSAHSWTAGRMVGQVVLVIAALGIAIPTLWVFVASFKD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSEFYGSPWTWPKGLHWQNYADAFVDAKLGQYFGTSVLVTVMSMAMVLVIALPCSYVLAR
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDFPGKKILKLAVQAGLFINVNYIVVPIFLMLVDADKLLYNIMPNGFFVNNVFILALVYA
CCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
STSLPFTIFLLQDFFASIPKDYEEAAMIDGASQTRIMTRIFFPMAMPAISMSMLFNFLTY
CCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNDYIISMTLMTGNNRTVQVGLLNLMQTQKAATNYGRLYAGMVIVMVPVLIFYAVVQKKL
HHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETSTMGGIK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]