| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is mraW [H]
Identifier: 213691742
GI number: 213691742
Start: 999855
End: 1000934
Strand: Direct
Name: mraW [H]
Synonym: Blon_0848
Alternate gene names: 213691742
Gene position: 999855-1000934 (Clockwise)
Preceding gene: 213691741
Following gene: 213691743
Centisome position: 35.3
GC content: 58.7
Gene sequence:
>1080_bases ATGGTTGATGTGGCGAATATTCATCTGCCGGTATTGCTTGACGATTGCGTGAACCTGATGGCGCCTGCCCTGGAACATGA GAACGCCGTTGCAGTGGATTGCACTTTGGGCCTTGCCGGCCATTCCATCGCCTTCCTCAAAACCGCGCCTCAGGCTCGGC TCATCGGCATTGACCGTGACAGCGAAGCGCTGGGGCTGGCCGCCGAACGCATGGAACGGGAGGGGCTCGCCGATCGATTC ATCCCAGTGCATGCCGCCTTCGATCAGCTTGATCAGGTGTTGACGGACCGAGGCATAGAACGTGTGGACGCCGTATTCAT GGATCTGGGATTATCCAGCCTGCAGATCGACGAAACCGATCGTGGCTTCTCCTATTCGCATGATGCGCCGCTGGATATGC GCATGGACGTCAGCCAGCCGTTGACGGCCGAACGGATTCTTGCCACCTATGATGCGGCGGAACTGGTCCGCATATTCAAG GAATACGGTGAAGAGCGTTTCTCGCGTCAGATCGCCCGCGCCATCGTGGCGCATCGAGACAAGGAGCCGTTTACCACCAC CGCACAGCTCAACCGTCTGGTCGATGAAGTGGTGCCGCAAGCCCACCGCCCGGCGGGCAATCCCGCCAAACGCGTCTTCC AGGCGTTGCGCATTGAAGTCAACGGCGAATTAGACAAGCTCGCCTCCACATTGCCGCAAGCCGCGAACCGACTGCATGTC GGGGGACGACTGGTGGTGGAGTCCTATCATTCGCTCGAAGACAAAACCGTCAAATCGTTCATGGCACAAGGGCTGCGAGT GGATGTTCCGGCTGGCCTGCCCGTCATACCGCCGGATGCCCAACCGTTTTTCACGGATCTCACGCGAGGTGCCATCAAGG CCGACGAACATGAAATCGCAGCCAACCCGAGATCGGCTTCGGTGCGGTTGCGGGCGGTGGAAGTCAGCCGTGATATTCCG TCACGATGGAGGAAACGCTTTACGCAAACCGCGCAGGGCCTGAATGACATCAATATACAAGGCTCCGCGTCTCCGGGCAG GGCCAAAAACACAGCACGAATTCGTACAAGGAGGGGATAA
Upstream 100 bases:
>100_bases CCGAACTGTGGAATAAGGACACGTGGGAGTCCTACCTCGCCGAGAAGGAAGAGGGATATTCCGACATTGCTGACGATGTG TTGCCGGAGGTGGAATTCTG
Downstream 100 bases:
>100_bases CAGCATATGGCAACCGCACGTAACATTCGATCGAACGCGGCTCCGGCCTCGAACCGGCCGCACACCAAGCATCAGTCCTC CTCCCGACCTGAGCTGCGGG
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVDVANIHLPVLLDDCVNLMAPALEHENAVAVDCTLGLAGHSIAFLKTAPQARLIGIDRDSEALGLAAERMEREGLADRF IPVHAAFDQLDQVLTDRGIERVDAVFMDLGLSSLQIDETDRGFSYSHDAPLDMRMDVSQPLTAERILATYDAAELVRIFK EYGEERFSRQIARAIVAHRDKEPFTTTAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLASTLPQAANRLHV GGRLVVESYHSLEDKTVKSFMAQGLRVDVPAGLPVIPPDAQPFFTDLTRGAIKADEHEIAANPRSASVRLRAVEVSRDIP SRWRKRFTQTAQGLNDINIQGSASPGRAKNTARIRTRRG
Sequences:
>Translated_359_residues MVDVANIHLPVLLDDCVNLMAPALEHENAVAVDCTLGLAGHSIAFLKTAPQARLIGIDRDSEALGLAAERMEREGLADRF IPVHAAFDQLDQVLTDRGIERVDAVFMDLGLSSLQIDETDRGFSYSHDAPLDMRMDVSQPLTAERILATYDAAELVRIFK EYGEERFSRQIARAIVAHRDKEPFTTTAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLASTLPQAANRLHV GGRLVVESYHSLEDKTVKSFMAQGLRVDVPAGLPVIPPDAQPFFTDLTRGAIKADEHEIAANPRSASVRLRAVEVSRDIP SRWRKRFTQTAQGLNDINIQGSASPGRAKNTARIRTRRG >Mature_359_residues MVDVANIHLPVLLDDCVNLMAPALEHENAVAVDCTLGLAGHSIAFLKTAPQARLIGIDRDSEALGLAAERMEREGLADRF IPVHAAFDQLDQVLTDRGIERVDAVFMDLGLSSLQIDETDRGFSYSHDAPLDMRMDVSQPLTAERILATYDAAELVRIFK EYGEERFSRQIARAIVAHRDKEPFTTTAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLASTLPQAANRLHV GGRLVVESYHSLEDKTVKSFMAQGLRVDVPAGLPVIPPDAQPFFTDLTRGAIKADEHEIAANPRSASVRLRAVEVSRDIP SRWRKRFTQTAQGLNDINIQGSASPGRAKNTARIRTRRG
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]
Homologues:
Organism=Homo sapiens, GI165377209, Length=272, Percent_Identity=36.7647058823529, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI165377202, Length=199, Percent_Identity=35.678391959799, Blast_Score=111, Evalue=8e-25, Organism=Escherichia coli, GI1786270, Length=313, Percent_Identity=38.6581469648562, Blast_Score=194, Evalue=7e-51, Organism=Drosophila melanogaster, GI62472493, Length=329, Percent_Identity=34.9544072948328, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571637, Length=329, Percent_Identity=34.9544072948328, Blast_Score=170, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002903 [H]
Pfam domain/function: PF01795 Methyltransf_5 [H]
EC number: NA
Molecular weight: Translated: 39612; Mature: 39612
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVANIHLPVLLDDCVNLMAPALEHENAVAVDCTLGLAGHSIAFLKTAPQARLIGIDRD CCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCEEEECCCC SEALGLAAERMEREGLADRFIPVHAAFDQLDQVLTDRGIERVDAVFMDLGLSSLQIDETD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCC RGFSYSHDAPLDMRMDVSQPLTAERILATYDAAELVRIFKEYGEERFSRQIARAIVAHRD CCCCCCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEPFTTTAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLASTLPQAANRLHV CCCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEC GGRLVVESYHSLEDKTVKSFMAQGLRVDVPAGLPVIPPDAQPFFTDLTRGAIKADEHEIA CCCCEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHC ANPRSASVRLRAVEVSRDIPSRWRKRFTQTAQGLNDINIQGSASPGRAKNTARIRTRRG CCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHEECCCC >Mature Secondary Structure MVDVANIHLPVLLDDCVNLMAPALEHENAVAVDCTLGLAGHSIAFLKTAPQARLIGIDRD CCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCEEEECCCC SEALGLAAERMEREGLADRFIPVHAAFDQLDQVLTDRGIERVDAVFMDLGLSSLQIDETD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCC RGFSYSHDAPLDMRMDVSQPLTAERILATYDAAELVRIFKEYGEERFSRQIARAIVAHRD CCCCCCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEPFTTTAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLASTLPQAANRLHV CCCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEC GGRLVVESYHSLEDKTVKSFMAQGLRVDVPAGLPVIPPDAQPFFTDLTRGAIKADEHEIA CCCCEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHC ANPRSASVRLRAVEVSRDIPSRWRKRFTQTAQGLNDINIQGSASPGRAKNTARIRTRRG CCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA