| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is hisB [H]
Identifier: 213691720
GI number: 213691720
Start: 972197
End: 972796
Strand: Direct
Name: hisB [H]
Synonym: Blon_0825
Alternate gene names: 213691720
Gene position: 972197-972796 (Clockwise)
Preceding gene: 213691719
Following gene: 213691721
Centisome position: 34.32
GC content: 63.17
Gene sequence:
>600_bases ATGGCAAGAACCGCGCACATCGTCCGCGAAACCAGCGAATCACACATCGACCTCGAACTGAACCTCGACGGCACCGGCAA AACCGATATCGATACATCCGTGCCGTTCTACAACCATATGATGACCGCGCTCGGCAAGCATTCGCTGATCGACCTGACCA TCCACGCCCACGGCGACACCGACATCGATGTGCACCACACCGTGGAAGATACGGCCATCGTGTTCGGCGAAGCCCTGAAG CAGGCTCTCGGCGACAAGAAAGGCATCCGCCGCTTCGCCGATGCCACCGTGCCGCTCGACGAGGCGCTGGCCAAGGCCGT TGTCGACATTTCCGGGCGCCCGTACTGCGTGTGCAGCGGCGAGCCCGAAGGCTACGAATTCTGCATGATCGGCGGGCACT TCACCGGCTCTCTGGTCCGCCACGTCATGGAATCCATCGCCTTCCACGCCGGCATCTGCCTGCACATGCAGGTGCTCGCC GGCCGCGACCCGCACCACATCGCTGAAGCCGAATTCAAGGCGCTGGCCCGTGCGCTGCGCTTCGCCATGGAAATCGACCC GCGTGTAGACGGCGTGCCCAGCACCAAGGGAGCCCTGTGA
Upstream 100 bases:
>100_bases GTGGAAGCAGCATAAGGGACGTTTCTTTCCGATTGCGGCGAGACCCGAAGCGATTCGAGTCCCGCCGCAATCCAATATGA CGAATCACACAGGAGACATG
Downstream 100 bases:
>100_bases TGGCCGACGACAAGTTCGATCCGGACGAATCGCACTTCTCCGACGAGGAGCTTGAGGCCGCGCTCGCCGGATTCGAGAAA GAATTCGCGGACGATTCGGC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MARTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALK QALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLA GRDPHHIAEAEFKALARALRFAMEIDPRVDGVPSTKGAL
Sequences:
>Translated_199_residues MARTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALK QALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLA GRDPHHIAEAEFKALARALRFAMEIDPRVDGVPSTKGAL >Mature_198_residues ARTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALKQ ALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAG RDPHHIAEAEFKALARALRFAMEIDPRVDGVPSTKGAL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=197, Percent_Identity=40.6091370558376, Blast_Score=149, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324776, Length=171, Percent_Identity=42.6900584795322, Blast_Score=128, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21622; Mature: 21491
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDT CCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC DIDVHHTVEDTAIVFGEALKQALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSG CCEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECC EPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAGRDPHHIAEAEFKALARALR CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FAMEIDPRVDGVPSTKGAL HHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ARTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDT CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC DIDVHHTVEDTAIVFGEALKQALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSG CCEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECC EPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAGRDPHHIAEAEFKALARALR CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FAMEIDPRVDGVPSTKGAL HHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA