| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is qmcA [H]
Identifier: 213691658
GI number: 213691658
Start: 884339
End: 885256
Strand: Direct
Name: qmcA [H]
Synonym: Blon_0762
Alternate gene names: 213691658
Gene position: 884339-885256 (Clockwise)
Preceding gene: 213691657
Following gene: 213691660
Centisome position: 31.22
GC content: 59.59
Gene sequence:
>918_bases ATGACCATCGCAAGTATGTTGGGCGGAACCATGCTGTTGGTGCTGATTCTATTAGTCGTTCTTATCGTGCTGCTGGCCGC CGCATTGTTCATCGTGCCGCAGCAGCAGGCGTATATCATCGAACGTTTCGGCAAGTTCTTGAGGGTCCAGTTTGCCGGTA TCCATGTCCGTATCCCGTTCGTCGACCGCATCGCCATGAAAACCAACATGCGTGTCAACCAGCTTAACGTGCAGCTGGAA ACCAAGACTCTTGACAACGTGTTCGTGACCGTCGTGGCTTCCACCCAGTTCCGCGTGAACCCGAACGACGTGGCAACCGC CTACTACGAGCTGCGCGACCCGGCCGGCCAGCTGAGGAGCTACATGGAGGACGCGCTGCGTTCCGCCATCCCGGCCCTAA CCTTGGATGACGCCTTTGCCCGCAAGGACGATGTGGCGTTCGACGTGCAGAAGACAGTGGGCGCCGAAATGAGCCGCTTC GGCTTCACCGTGGTCAAGACGCTGATCACCGCCATCGACCCGAGCCCGCAGGTCAAGAACGCGATGGACTCCATCAACGC CGCCCAGCGTGAAAAGGAAGCCACCCGTCAGCGTGCCGAGGCCCAGCGCATCCAGATCGAGACCCAGGCCGCCGCCGATG CGGAGAAGACTCGCTTGCAGGGTGAGGGCCAGGCCAACTATCGTCGCGAGATTGCCAACGGTATCGTCGACCAAATCAAG AGCCTGCAGGCTGTGGGTATGAACATCAACGACGTGAACAACGTGGTGCTGTTCAACCAGTATCTTGACGTGATGCGCTC GCTGTCCGAATCAGGCAATGCCAAGACCGTGGTGCTGCCCGCCTCCACGCCCGGCGGTTATCAGGATCTCTACGAGCAGG TCACCAAGGCCATGCTCACCGCGGCCGAGACGAAGTAA
Upstream 100 bases:
>100_bases GTGAGAGCTATCAGTTACCGGGCGTGCGCTGGTAGCATGGATGGTGTTGGGGCGCGGCACAACGATATGCCGTGCTTGAC CCTTGTGAGAGGAGTTTTAT
Downstream 100 bases:
>100_bases TCACCCCGTTTGCAAATCCTCATCCATCGATAGTGAAGCCCCTCCAAGCGAGGGGCTTCACTGCGTTCCGCGCTGATTCC GACAAGTGCGCAAATGGGCC
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTIASMLGGTMLLVLILLVVLIVLLAAALFIVPQQQAYIIERFGKFLRVQFAGIHVRIPFVDRIAMKTNMRVNQLNVQLE TKTLDNVFVTVVASTQFRVNPNDVATAYYELRDPAGQLRSYMEDALRSAIPALTLDDAFARKDDVAFDVQKTVGAEMSRF GFTVVKTLITAIDPSPQVKNAMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIK SLQAVGMNINDVNNVVLFNQYLDVMRSLSESGNAKTVVLPASTPGGYQDLYEQVTKAMLTAAETK
Sequences:
>Translated_305_residues MTIASMLGGTMLLVLILLVVLIVLLAAALFIVPQQQAYIIERFGKFLRVQFAGIHVRIPFVDRIAMKTNMRVNQLNVQLE TKTLDNVFVTVVASTQFRVNPNDVATAYYELRDPAGQLRSYMEDALRSAIPALTLDDAFARKDDVAFDVQKTVGAEMSRF GFTVVKTLITAIDPSPQVKNAMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIK SLQAVGMNINDVNNVVLFNQYLDVMRSLSESGNAKTVVLPASTPGGYQDLYEQVTKAMLTAAETK >Mature_304_residues TIASMLGGTMLLVLILLVVLIVLLAAALFIVPQQQAYIIERFGKFLRVQFAGIHVRIPFVDRIAMKTNMRVNQLNVQLET KTLDNVFVTVVASTQFRVNPNDVATAYYELRDPAGQLRSYMEDALRSAIPALTLDDAFARKDDVAFDVQKTVGAEMSRFG FTVVKTLITAIDPSPQVKNAMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIKS LQAVGMNINDVNNVVLFNQYLDVMRSLSESGNAKTVVLPASTPGGYQDLYEQVTKAMLTAAETK
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=284, Percent_Identity=27.112676056338, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1786697, Length=279, Percent_Identity=24.3727598566308, Blast_Score=82, Evalue=4e-17, Organism=Caenorhabditis elegans, GI32564147, Length=273, Percent_Identity=23.0769230769231, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550506, Length=273, Percent_Identity=23.0769230769231, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 33704; Mature: 33573
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIASMLGGTMLLVLILLVVLIVLLAAALFIVPQQQAYIIERFGKFLRVQFAGIHVRIPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEEEECH VDRIAMKTNMRVNQLNVQLETKTLDNVFVTVVASTQFRVNPNDVATAYYELRDPAGQLRS HHHHHHHHCCEEEEEEEEEEEEHHCCEEEEEEECCEEEECCHHHHHHHHHHCCCHHHHHH YMEDALRSAIPALTLDDAFARKDDVAFDVQKTVGAEMSRFGFTVVKTLITAIDPSPQVKN HHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIK HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHH SLQAVGMNINDVNNVVLFNQYLDVMRSLSESGNAKTVVLPASTPGGYQDLYEQVTKAMLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH AAETK HHCCC >Mature Secondary Structure TIASMLGGTMLLVLILLVVLIVLLAAALFIVPQQQAYIIERFGKFLRVQFAGIHVRIPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEEEECH VDRIAMKTNMRVNQLNVQLETKTLDNVFVTVVASTQFRVNPNDVATAYYELRDPAGQLRS HHHHHHHHCCEEEEEEEEEEEEHHCCEEEEEEECCEEEECCHHHHHHHHHHCCCHHHHHH YMEDALRSAIPALTLDDAFARKDDVAFDVQKTVGAEMSRFGFTVVKTLITAIDPSPQVKN HHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIK HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHH SLQAVGMNINDVNNVVLFNQYLDVMRSLSESGNAKTVVLPASTPGGYQDLYEQVTKAMLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH AAETK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]