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The map label for this gene is aspS

Identifier: 213691602

GI number: 213691602

Start: 812787

End: 814586

Strand: Direct

Name: aspS

Synonym: Blon_0706

Alternate gene names: 213691602

Gene position: 812787-814586 (Clockwise)

Preceding gene: 213691601

Following gene: 213691605

Centisome position: 28.69

GC content: 63.72

Gene sequence:

>1800_bases
ATGAGCCAGACGGCTTACAGAACACATCATGCCACTGAAGTGACCGAGGCCCTGGTCGGCCAGAAGGTCACCCTTGCCGG
TTGGGTTGACCGACGCCGTGATCACGGTGGCGTGGCCTTCATCGACCTTCGTGATTCGACCGGCCTCGTGCAGGTCGTCA
TTTACGACGAGGATATGGCCCGCCCGCTGCGCAGCGAATTCGTGATTCAGATTACCGGCGAAGTGCGCCTGCGCCCGGAT
GGCAACGAGAACACCCATCTGGCCACCGGCAAGATCGAGGTTGTGGCCGAGACCATTGAGATCCTCGCCAAGTCCGACGC
TCTGCCGTTCCAGGTTTCCACCGCTCTCGAGAATGAGTCCGAGAACAAGCTGCCGGGCGAGGACGTGCGTCTGAAGTACC
GTTACCTCGACCTGCGCCGTCCGTCCATGCAGCACAATCTGAAGCTGCGTTCCGACATGGCTAAGGCCGCCCGCCACGCG
CTGGAAGACATGGACTTCACCGAGGTCGAGACCCCGACCTTCATTAAGTCCACCCCGGAAGGCGCCCGCGACTTCGTGGT
GCCGGCCCGTCTGGTGCCCGGTTCCTGGTACGCCCTGCCGCAGTCCCCGCAGCTCCTCAAGCAGCTGCTCATGGTCTCCG
GTGTCGAGCGTTACTACCAGCTCGCCCGCTGCTACCGTGACGAGGACTTCCGCGCCGACCGTCAGCCCGAGTTCACTCAG
CTCGATATGGAGATGGCCTACGTGGACCAGGAAGATGTGATGGCCATGACTGAGAAGGTCATCGCCGCCATCTGGAAGTC
CGCCGGCTATGAGGTCCAGCTGCCGCTACCGCGCATCACCTGGAAGGATGCGATGGACAAGTACGGCTCCGACAAGCCGG
ACCTGCGCTTCGGCAACCCGCTGGTGGAACTGACCGAGTACTTCAAGAACACGCCGTTCCGCGTGTTCCAGGCCCCGTAC
GTGGGTGCCGTGGTCTTCAAGGGCGGTGCCGCCACGCCGCGTCGTCAGTTCGACGCTTGGCAGGATTGGGCTCGTCAGCG
TGGCGCCAAGGGCCTTGCCTACGTGGTCTTCGGCGAAAACGGCGAACTCAAGGGCCCCGTCGCCAAGAACCTGTCCGATG
AGGAGCGCAACGGCCTGCGCGAGGCCGTCGGTGCCGAGGAAGGCGACGCCGTCTTCTTCGCCGCCGGTTCTCGCGAGTCC
GCCCAGCTGCTGCTCGGCGCGGTGCGTGTGGAGCTTGCCTCCCGCGAAGGCCTGCTGGATCCGAAGAAGTTCGCTTTCAC
TTGGGTCGTGGACTTCCCGCTGTTCAAGCCCACGGATGACCCGGATGATGACGATGTGGCTGTCGGCCACTCCAAGTGGA
CCTCCATGCACCACCCGTTCACCATGCCCTCCAAGGATTGGATCGACAAGTTCGACAAGGACCCCGAGCACGCCATGTCC
GATTCCTACGACATCGTCTGCAACGGTGAGGAGATGGGCGGCGGTTCCGTTCGTATCCATCGTGACGACATCCAAGCCCG
TGTGCTCGATGTGCTGGGCATCACCAAGGAAGAGGCCGACGAGAAGTTCGGCTTCCTGCTTGAGGCATTCAAGTATGGCG
CTCCGCCTCACGCGGGTTTGGCCCTCGGTTGGGACCGCACCGTGTCCATCCTGGCCGGTGCCGACTCCATCCGCGACGTC
ATCGCCTTCCCGAAGGCCGGCGGCGGCCGCGACCCGCTGACCGGTGCTCCGGCCCCGATTTCCGACGAGCAGCGCGCCGA
GACTGGCGTCGACTACGACCCGGACGCCGACGAAAACTAA

Upstream 100 bases:

>100_bases
TTGCCGCCGATTGCACGTCGTGGGAGCCGGATACTGTGGTTGCCCAGCAAACCGTCGAAATCTGACGTATTCGCGCGAAA
AATCGAGGAGAAACAAGACA

Downstream 100 bases:

>100_bases
TCTACGGAGCGTATACCGCCTTTCCTCAGCACTCGACGCACCTTAGTGCGCCTTCGGCTTCGAACGGCGGTCTCCGCATG
CGTAGATTAATTTTCGAGGA

Product: aspartyl-tRNA synthetase

Products: NA

Alternate protein names: Aspartate--tRNA ligase; AspRS

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MSQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDEDMARPLRSEFVIQITGEVRLRPD
GNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHA
LEDMDFTEVETPTFIKSTPEGARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ
LDMEMAYVDQEDVMAMTEKVIAAIWKSAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLVELTEYFKNTPFRVFQAPY
VGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFGENGELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRES
AQLLLGAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMS
DSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDV
IAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDADEN

Sequences:

>Translated_599_residues
MSQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDEDMARPLRSEFVIQITGEVRLRPD
GNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHA
LEDMDFTEVETPTFIKSTPEGARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ
LDMEMAYVDQEDVMAMTEKVIAAIWKSAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLVELTEYFKNTPFRVFQAPY
VGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFGENGELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRES
AQLLLGAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMS
DSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDV
IAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDADEN
>Mature_598_residues
SQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDEDMARPLRSEFVIQITGEVRLRPDG
NENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHAL
EDMDFTEVETPTFIKSTPEGARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQL
DMEMAYVDQEDVMAMTEKVIAAIWKSAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLVELTEYFKNTPFRVFQAPYV
GAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFGENGELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESA
QLLLGAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMSD
SYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVI
AFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDADEN

Specific function: Unknown

COG id: COG0173

COG function: function code J; Aspartyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Homo sapiens, GI40789249, Length=604, Percent_Identity=39.4039735099338, Blast_Score=424, Evalue=1e-118,
Organism=Homo sapiens, GI194272210, Length=273, Percent_Identity=25.6410256410256, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI5031815, Length=273, Percent_Identity=25.6410256410256, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI45439306, Length=298, Percent_Identity=25.503355704698, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4758762, Length=259, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI1788173, Length=609, Percent_Identity=43.3497536945813, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1789256, Length=283, Percent_Identity=26.1484098939929, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1790571, Length=285, Percent_Identity=25.2631578947368, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32566633, Length=625, Percent_Identity=34.72, Blast_Score=309, Evalue=3e-84,
Organism=Caenorhabditis elegans, GI71994340, Length=327, Percent_Identity=25.0764525993884, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17535925, Length=328, Percent_Identity=24.6951219512195, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17551876, Length=274, Percent_Identity=26.2773722627737, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17535927, Length=328, Percent_Identity=24.6951219512195, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71984122, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6325153, Length=646, Percent_Identity=34.0557275541796, Blast_Score=317, Evalue=4e-87,
Organism=Saccharomyces cerevisiae, GI6323011, Length=281, Percent_Identity=28.1138790035587, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321807, Length=325, Percent_Identity=24.6153846153846, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6320242, Length=266, Percent_Identity=24.4360902255639, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24584738, Length=608, Percent_Identity=38.1578947368421, Blast_Score=383, Evalue=1e-106,
Organism=Drosophila melanogaster, GI17136276, Length=255, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24640849, Length=259, Percent_Identity=25.4826254826255, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640851, Length=259, Percent_Identity=25.4826254826255, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI19921528, Length=288, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYD_BIFLD (B3DPM0)

Other databases:

- EMBL:   CP000605
- RefSeq:   YP_001953962.1
- GeneID:   6364380
- GenomeReviews:   CP000605_GR
- KEGG:   blj:BLD_0018
- HOGENOM:   HBG396032
- OMA:   AFPKTQQ
- ProtClustDB:   PRK00476
- GO:   GO:0005737
- HAMAP:   MF_00044_B
- InterPro:   IPR004364
- InterPro:   IPR018150
- InterPro:   IPR006195
- InterPro:   IPR020564
- InterPro:   IPR004524
- InterPro:   IPR018153
- InterPro:   IPR002312
- InterPro:   IPR004115
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365
- Gene3D:   G3DSA:3.30.1360.30
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR22594
- PANTHER:   PTHR22594:SF5
- PRINTS:   PR01042
- TIGRFAMs:   TIGR00459

Pfam domain/function: PF02938 GAD; PF00152 tRNA-synt_2; PF01336 tRNA_anti; SSF50249 Nucleic_acid_OB

EC number: =6.1.1.12

Molecular weight: Translated: 66911; Mature: 66780

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDEDMA
CCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEEEEECCCCCEEEEEEECCHHH
RPLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENES
CCCCCCEEEEEECEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEHHHHCCCC
ENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPE
CCCCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ
CCCCCEECEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHE
LDMEMAYVDQEDVMAMTEKVIAAIWKSAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNP
ECEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCH
LVELTEYFKNTPFRVFQAPYVGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFGEN
HHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
GELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAVRVELASREGLLD
CCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMS
CCCEEEEEEEECCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHCCCHHHHHC
DSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHAGL
CCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE
ALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDADEN
EECCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDEDMA
CCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEEEEECCCCCEEEEEEECCHHH
RPLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENES
CCCCCCEEEEEECEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEHHHHCCCC
ENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPE
CCCCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ
CCCCCEECEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHE
LDMEMAYVDQEDVMAMTEKVIAAIWKSAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNP
ECEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCH
LVELTEYFKNTPFRVFQAPYVGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFGEN
HHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
GELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAVRVELASREGLLD
CCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMS
CCCEEEEEEEECCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHCCCHHHHHC
DSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHAGL
CCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE
ALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDADEN
EECCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA