| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691600
Identifier: 213691600
GI number: 213691600
Start: 809779
End: 811251
Strand: Reverse
Name: 213691600
Synonym: Blon_0704
Alternate gene names: NA
Gene position: 811251-809779 (Counterclockwise)
Preceding gene: 213691603
Following gene: 213691597
Centisome position: 28.64
GC content: 65.99
Gene sequence:
>1473_bases ATGGCCGACGAAACTGTCACCGAACCCGTAAACACCGCTGCGCCCGAAGAGCAGGCAACGACACCCGCACCCGAAGCCAG CGCGGCCACGCCGGCGCCGACTCCGTCCCCCGCTTCCATGCCGAAACCGCACGCGCCCTCCCCCGCCGCCTTCGCCAAGA AGACTCCCACGGTCAAGCAGCATGCCGCCGCCCCCGCGGCCGCCCCCGCGGCCGCCCCCGCCGCCTATTCCGAGGCCGAC GTCAAAGCCGCCGAAGCTTTCGGCCGGGTCGATGACAACGGCGCCGTCTTCGTCAAGGACGGCGACGGCGAACGTGAGGT CGGACAGTTCCCGGACGCCTCCAAGGAAGAGGCGCTGGCACTGTACGCCCGTCGCTTCCTGGATCTCAAGGCCAAGCTCG ATCTGCTGGCCGCGCGCCTGACCTCCCCCAACATCAAGACCCGTGAAATCGACGAGTCCGTGAAGCTGCTGGGCGAAGAA ACCGCCGAACCGGCGGTGGTGGGCGACCTCGCGGCCCTCAAGGCCCGTTACGCGGAACTGAAGGCCGCCGGCGAGGCCAA GAAGGCCGAGATCGCCGAAGCGCGCAAGGCCGCTCAGGCCAAGGCCGTCGCCGAGCGCACCACCATCGTCGAGAAGGCCG AAGCTCTGGCGGCCTCCCTGGGCGACAACACCAACTGGCGCTCCACCGCCGACAAGTTCCGTAACCTGTTCGACGAGTGG CAGAACCACCAGCGCACCACCGTGCGCATCGACAAGCCGGAGGCCGAGGCGCTGTGGAAGCGCTTCTCCGCCGCCCGCAC CACCTTCAACCAGGCTCGCCGCAAGTGGGCTCAGGCTCGCGACAACGAGCGTACAGCCGCCAAGGAAGCCAAGGAAGCGA TTATCGCCGAGGCCAATGAGCTCAAGGATTCCACCGCTTGGGGTGAGACTTCCCGCAAGTTCAACGATCTGATGGACCGT TGGAAGAAGGCCGGCCGCGCTGGCCGTAACGAGGACGACGAGCTGTGGGCCAAGTTCCGCGAAGCCGCCGACACCTTCTT CAACGCTCGTCAGGCCGATCGCGATCAGATCAACTCCTCCGAGAAGGAGAATCTGGCTGCCAAGGAGGCTCTGCTGGTCA AGGCCGAGGCTCTGGTGCCGGTGAAGACCGACGCCGAGGCCAAGAAGGCCCGCCAGGAGCTGGCCAAGATTCAGGAAGAG TGGGATCAGATCGGTTACGTGCCGCGTGACGATATGCGCCGCATCGAGAACCGTCTCGACGCCGTTGACAAGCAGATCAA GGCCATCGAGGATGCCGCTTGGAAGCAGACCGACCCGGAGGCCGACGCCCGCAAGTCCAGCTTCGAGGAGCAGCTCAACG CCCAGCTCGCCGAGCTCGACGCCAAGATCGCGGCCGAATCCGACCCGAAGAAGAAGGCCAAGCTCGAAGCCGAGAAGGCC ACCAAGGAGCAGTGGCTGAACGCCATCAAGTAA
Upstream 100 bases:
>100_bases CGAAATCAATATAATAGGTGAGGGTTGCGTCAAAACTTCCTGGTTCGCCCGGGATGGGAGACGCTCCCGCTTATGCATTC TACGCTTTAAGGAGCTGGCC
Downstream 100 bases:
>100_bases GGGTCTCGTGCCAGGTTCCCCTCTGAGGGAAGCCGGCAGCAAGGCTGACTGAGGGGAGTTTACGGTTATACCGCAAGCTC CCCTCAGTCGCCTACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase; DNA Repair ATPase; Methyl-Accepting Chemotaxis Protein
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MADETVTEPVNTAAPEEQATTPAPEASAATPAPTPSPASMPKPHAPSPAAFAKKTPTVKQHAAAPAAAPAAAPAAYSEAD VKAAEAFGRVDDNGAVFVKDGDGEREVGQFPDASKEEALALYARRFLDLKAKLDLLAARLTSPNIKTREIDESVKLLGEE TAEPAVVGDLAALKARYAELKAAGEAKKAEIAEARKAAQAKAVAERTTIVEKAEALAASLGDNTNWRSTADKFRNLFDEW QNHQRTTVRIDKPEAEALWKRFSAARTTFNQARRKWAQARDNERTAAKEAKEAIIAEANELKDSTAWGETSRKFNDLMDR WKKAGRAGRNEDDELWAKFREAADTFFNARQADRDQINSSEKENLAAKEALLVKAEALVPVKTDAEAKKARQELAKIQEE WDQIGYVPRDDMRRIENRLDAVDKQIKAIEDAAWKQTDPEADARKSSFEEQLNAQLAELDAKIAAESDPKKKAKLEAEKA TKEQWLNAIK
Sequences:
>Translated_490_residues MADETVTEPVNTAAPEEQATTPAPEASAATPAPTPSPASMPKPHAPSPAAFAKKTPTVKQHAAAPAAAPAAAPAAYSEAD VKAAEAFGRVDDNGAVFVKDGDGEREVGQFPDASKEEALALYARRFLDLKAKLDLLAARLTSPNIKTREIDESVKLLGEE TAEPAVVGDLAALKARYAELKAAGEAKKAEIAEARKAAQAKAVAERTTIVEKAEALAASLGDNTNWRSTADKFRNLFDEW QNHQRTTVRIDKPEAEALWKRFSAARTTFNQARRKWAQARDNERTAAKEAKEAIIAEANELKDSTAWGETSRKFNDLMDR WKKAGRAGRNEDDELWAKFREAADTFFNARQADRDQINSSEKENLAAKEALLVKAEALVPVKTDAEAKKARQELAKIQEE WDQIGYVPRDDMRRIENRLDAVDKQIKAIEDAAWKQTDPEADARKSSFEEQLNAQLAELDAKIAAESDPKKKAKLEAEKA TKEQWLNAIK >Mature_489_residues ADETVTEPVNTAAPEEQATTPAPEASAATPAPTPSPASMPKPHAPSPAAFAKKTPTVKQHAAAPAAAPAAAPAAYSEADV KAAEAFGRVDDNGAVFVKDGDGEREVGQFPDASKEEALALYARRFLDLKAKLDLLAARLTSPNIKTREIDESVKLLGEET AEPAVVGDLAALKARYAELKAAGEAKKAEIAEARKAAQAKAVAERTTIVEKAEALAASLGDNTNWRSTADKFRNLFDEWQ NHQRTTVRIDKPEAEALWKRFSAARTTFNQARRKWAQARDNERTAAKEAKEAIIAEANELKDSTAWGETSRKFNDLMDRW KKAGRAGRNEDDELWAKFREAADTFFNARQADRDQINSSEKENLAAKEALLVKAEALVPVKTDAEAKKARQELAKIQEEW DQIGYVPRDDMRRIENRLDAVDKQIKAIEDAAWKQTDPEADARKSSFEEQLNAQLAELDAKIAAESDPKKKAKLEAEKAT KEQWLNAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53762; Mature: 53631
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADETVTEPVNTAAPEEQATTPAPEASAATPAPTPSPASMPKPHAPSPAAFAKKTPTVKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH HAAAPAAAPAAAPAAYSEADVKAAEAFGRVDDNGAVFVKDGDGEREVGQFPDASKEEALA HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCHHHHHH LYARRFLDLKAKLDLLAARLTSPNIKTREIDESVKLLGEETAEPAVVGDLAALKARYAEL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KAAGEAKKAEIAEARKAAQAKAVAERTTIVEKAEALAASLGDNTNWRSTADKFRNLFDEW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QNHQRTTVRIDKPEAEALWKRFSAARTTFNQARRKWAQARDNERTAAKEAKEAIIAEANE HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LKDSTAWGETSRKFNDLMDRWKKAGRAGRNEDDELWAKFREAADTFFNARQADRDQINSS HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC EKENLAAKEALLVKAEALVPVKTDAEAKKARQELAKIQEEWDQIGYVPRDDMRRIENRLD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AVDKQIKAIEDAAWKQTDPEADARKSSFEEQLNAQLAELDAKIAAESDPKKKAKLEAEKA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TKEQWLNAIK HHHHHHHHCC >Mature Secondary Structure ADETVTEPVNTAAPEEQATTPAPEASAATPAPTPSPASMPKPHAPSPAAFAKKTPTVKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH HAAAPAAAPAAAPAAYSEADVKAAEAFGRVDDNGAVFVKDGDGEREVGQFPDASKEEALA HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCHHHHHH LYARRFLDLKAKLDLLAARLTSPNIKTREIDESVKLLGEETAEPAVVGDLAALKARYAEL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KAAGEAKKAEIAEARKAAQAKAVAERTTIVEKAEALAASLGDNTNWRSTADKFRNLFDEW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QNHQRTTVRIDKPEAEALWKRFSAARTTFNQARRKWAQARDNERTAAKEAKEAIIAEANE HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LKDSTAWGETSRKFNDLMDRWKKAGRAGRNEDDELWAKFREAADTFFNARQADRDQINSS HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC EKENLAAKEALLVKAEALVPVKTDAEAKKARQELAKIQEEWDQIGYVPRDDMRRIENRLD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AVDKQIKAIEDAAWKQTDPEADARKSSFEEQLNAQLAELDAKIAAESDPKKKAKLEAEKA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TKEQWLNAIK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA