| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691581
Identifier: 213691581
GI number: 213691581
Start: 788673
End: 789224
Strand: Reverse
Name: 213691581
Synonym: Blon_0685
Alternate gene names: NA
Gene position: 789224-788673 (Counterclockwise)
Preceding gene: 213691582
Following gene: 213691580
Centisome position: 27.86
GC content: 58.51
Gene sequence:
>552_bases ATGCGGGCGAAATGCCCGCTTTGGGCACGTATCGTCCTGGCTTGTGGCGCCGTATTGCTGCTGCTGGTTGCCGGCGTGGC GTCAGTAAACCTGTCCGCTTCGATTACGTTCAATCAGGCCACCGCATCATTGAACGCCAATATCAAAGCGGCTCAGGACG AGTCGACTGATATCAACACGCTCAAGGCGCAACAGCAGCAGACCGATGCGCAATTCGCCGAGGCCGGGCGAATGCGCACG CTTCTGTTGCCGCAAGTCAAGGACGCCATCGACACCAATGCTTCGATTTCTTCCGAGCTGACGAAGATCACCCTGAAACA GGCCGAGGCGCAGAACAGCGGTTCCGGTTCCGGGCAAGCCCAGTCGGCACAGCAATCCGAGAGTTCCTCATCCAATGCAA AAAAGGGCGGCGCGTTGACCGACGAGCAGAAGAAGCAGGTCGAGGAGCTGATGAAGGCCAATCAGCAATCCACCGATACC CAGTCGAACACCACCCAATCCGAGCAGAAGGCGACGCAGAACAAGGGTACCGGGGCTACCAAGCCGTGGTGA
Upstream 100 bases:
>100_bases TGCTTGCCATGGAAGTCGGTGCATGGATCGCAACCTCAAGGAGGCTGCTGTGAGGAACAGTAACGAAATCCACGAGAACG ATGGCTCGGCGAATATTCGG
Downstream 100 bases:
>100_bases GCAATCGTTCACGGTTGCTCTTTTTCTCACACCCTCACGGGTCATGGCTTTATCGCGGCTGTTTCCCGGTTTCGGCTGTC GGCTTTGGCGTTTGTCCAAT
Product: cell surface elastin binding protein EbpS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRAKCPLWARIVLACGAVLLLLVAGVASVNLSASITFNQATASLNANIKAAQDESTDINTLKAQQQQTDAQFAEAGRMRT LLLPQVKDAIDTNASISSELTKITLKQAEAQNSGSGSGQAQSAQQSESSSSNAKKGGALTDEQKKQVEELMKANQQSTDT QSNTTQSEQKATQNKGTGATKPW
Sequences:
>Translated_183_residues MRAKCPLWARIVLACGAVLLLLVAGVASVNLSASITFNQATASLNANIKAAQDESTDINTLKAQQQQTDAQFAEAGRMRT LLLPQVKDAIDTNASISSELTKITLKQAEAQNSGSGSGQAQSAQQSESSSSNAKKGGALTDEQKKQVEELMKANQQSTDT QSNTTQSEQKATQNKGTGATKPW >Mature_183_residues MRAKCPLWARIVLACGAVLLLLVAGVASVNLSASITFNQATASLNANIKAAQDESTDINTLKAQQQQTDAQFAEAGRMRT LLLPQVKDAIDTNASISSELTKITLKQAEAQNSGSGSGQAQSAQQSESSSSNAKKGGALTDEQKKQVEELMKANQQSTDT QSNTTQSEQKATQNKGTGATKPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19284; Mature: 19284
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAKCPLWARIVLACGAVLLLLVAGVASVNLSASITFNQATASLNANIKAAQDESTDINT CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEECCCCCCCHHH LKAQQQQTDAQFAEAGRMRTLLLPQVKDAIDTNASISSELTKITLKQAEAQNSGSGSGQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH QSAQQSESSSSNAKKGGALTDEQKKQVEELMKANQQSTDTQSNTTQSEQKATQNKGTGAT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC KPW CCC >Mature Secondary Structure MRAKCPLWARIVLACGAVLLLLVAGVASVNLSASITFNQATASLNANIKAAQDESTDINT CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEECCCCCCCHHH LKAQQQQTDAQFAEAGRMRTLLLPQVKDAIDTNASISSELTKITLKQAEAQNSGSGSGQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH QSAQQSESSSSNAKKGGALTDEQKKQVEELMKANQQSTDTQSNTTQSEQKATQNKGTGAT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC KPW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA