| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is yqjI [H]
Identifier: 213691564
GI number: 213691564
Start: 768506
End: 770476
Strand: Reverse
Name: yqjI [H]
Synonym: Blon_0666
Alternate gene names: 213691564
Gene position: 770476-768506 (Counterclockwise)
Preceding gene: 213691565
Following gene: 213691563
Centisome position: 27.2
GC content: 58.4
Gene sequence:
>1971_bases ATGGGTGTGACAGGCACCGGTAAAACGACCATGGCTCAGGAACTCGTAAACGAATTGGGATGGCCATATGCCGAAGCCGA CGATTTCCATCCCCAAGCCAATATCGACAAAATGGCCTCTGGTCATCCACTGACCGATGAGGACCGTTGGCCCTGGCTTC GCAGCCTACGCGATTGGATCACCGAGCAGGCAGGCAAGGGAGCCAACACCATCGTCACTTGTTCCGCGTTGAAACGCGCA TATCGCGACATCCTACGAGAGGCGAACGCACAAGTCGTTTTCGTCGAGCTTGATCTCGATAAAACCGATATCGCCGAACG TATGACGCAGCGTGAGCATTTCATGCCCGTCGAGCTTCTGCAATCGCAGATTGACACTTTGGAGCCTCTCGAGGCTGATG AGCACGGCATACGGCTCATTTCCAACTTGCCTCCAGAGGTGCTATGCCACGAGGCATTGAGTCAATTGGGATTGGCTCTC AGCAATATCATTCATTTGAACGAACGGCAACAGCAAGGGGATACAATCATGACAGCACAAGCTAACATCGGCGTTATCGG TCTCGCTGCAATGGGCAGCAACCTGGCCCGCAATCTCGCCCACCACGGCAACACCGTGGCACTGTTCAATCGCCATTACT CGCGTACTGAAAAGCTGCTGGCCGAGCACGGCACCGAAGGCAATTTCATTCCTGCTAAGACCATGGAGGAATTCGCCGCT TCCCTGCAACGTCCTCGTACCGCCATCATCATGGTCAAGGCCGGAGCTCCGACCGATGCCGTGATCAAGCAGCTCGAAGA GGCCTTCGAGCCTGGCGACATCATCGTCGACGGTGGAAACTCCTACTTCAAGGACACCATCAAGCGTGAGAAGGAAGTGC GCGCCGCTGGATTCCACTTCGTCGGTTGCGGCGTGTCCGGTGGCGAGGAAGGCGCTCTGAACGGTCCTTCCCTTATGCCG GGAGGCACCGCCGAATCGTGGAAGACCCTTGGTCCGATTCTTGAATCCATCGCTGCCAAGGTCGACGGTGAGCCTTGCGT CACGCATATCGGCACCGATGGCGCCGGACATTTCGTCAAGATGGTGCACAACGGCATCGAATACGCCGACATGCAGGTCA TCGGCGAAGCCTACGACATTCTGCGTCGCGGTCTGGGACTTTCCCCCGAGGCGATTGGCGATGTGTTCGCCGATTGGAAC AAGGGCGATCTTGATTCCTATCTGATTGAGATCACCGCCGATATCCTTCATGAGAAGGACGAGCGTACCGGCAAGCCGTT CGTCGATGTCGTCGTCGATCGCGCAGGTATGAAGGGCACTGGTACGTGGACGGTGCAGACCGCACTGGAGTTCGGTTCCC CTGTCACCGGCATCGGAGAGGCTGTGTTCGCGCGTGCGCTGTCGAGCCATCCTGAGCTGAGGCAAGCCGCGCAGGACAGC GCGCCTGCAGGCCCCAACAATGCCATCACCGTGGGGGACCAGGCGACCTTCATCGAAGACGTGCGTCGCGCATTGCTCGC TTCCAAGATCATCGCCTATTCTCAGGGACTCAACGAGATCGAGGATGGCGCCAAGCAGTATGGCTGGAACATCGACCTGG GAGCCGTCGCCAAGATCTGGCGTGGAGGCTGCATCATTCGTGCGAAGTTCCTCAACCGCATTACCGACGCCTACACCAAC GGCCATCCTGCGGCACTGGCGCTCGATCCGTACTTCGCCAAGTTCCTTGCCGACGCGCAGGAGTCTTGGCGTCGAGTCAT CAAGGCGGCCATCGACGCAGGCATTCCGACGCCTGTCTTCTCCAGCTCCTTGGCGTACTACGACGGACTGCGTTCGAAGC GTCTGCCTACTGCACTGACCCAGGCACAGCGTGACTTCTTCGGAGCTCACACCTATGGTCGCGTGGATACGCCCGGCGTC TTCCACAAGCTGTGGGCTGAGCAGAACCGCCCGGAAGAGCAGCAGGCCTGA
Upstream 100 bases:
>100_bases TCATTATCGGGCGATTGGAACGTATTCGGGTCTGATCGCCCTTTCCATTCAAGGAGAATCCATGCTTGATTCCAATGCCG AACCCGTCAGTCTGATCGTC
Downstream 100 bases:
>100_bases TGTAAAAGGGAAATAAAAAGCTGACGCTTTTAACCGTACCCCGATTATCGGACTGAAGAAATTCGGATGATAATCGAGAT GCGGTTTTCTTTTATGGATA
Product: 6-phosphogluconate dehydrogenase, decarboxylating
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MGVTGTGKTTMAQELVNELGWPYAEADDFHPQANIDKMASGHPLTDEDRWPWLRSLRDWITEQAGKGANTIVTCSALKRA YRDILREANAQVVFVELDLDKTDIAERMTQREHFMPVELLQSQIDTLEPLEADEHGIRLISNLPPEVLCHEALSQLGLAL SNIIHLNERQQQGDTIMTAQANIGVIGLAAMGSNLARNLAHHGNTVALFNRHYSRTEKLLAEHGTEGNFIPAKTMEEFAA SLQRPRTAIIMVKAGAPTDAVIKQLEEAFEPGDIIVDGGNSYFKDTIKREKEVRAAGFHFVGCGVSGGEEGALNGPSLMP GGTAESWKTLGPILESIAAKVDGEPCVTHIGTDGAGHFVKMVHNGIEYADMQVIGEAYDILRRGLGLSPEAIGDVFADWN KGDLDSYLIEITADILHEKDERTGKPFVDVVVDRAGMKGTGTWTVQTALEFGSPVTGIGEAVFARALSSHPELRQAAQDS APAGPNNAITVGDQATFIEDVRRALLASKIIAYSQGLNEIEDGAKQYGWNIDLGAVAKIWRGGCIIRAKFLNRITDAYTN GHPAALALDPYFAKFLADAQESWRRVIKAAIDAGIPTPVFSSSLAYYDGLRSKRLPTALTQAQRDFFGAHTYGRVDTPGV FHKLWAEQNRPEEQQA
Sequences:
>Translated_656_residues MGVTGTGKTTMAQELVNELGWPYAEADDFHPQANIDKMASGHPLTDEDRWPWLRSLRDWITEQAGKGANTIVTCSALKRA YRDILREANAQVVFVELDLDKTDIAERMTQREHFMPVELLQSQIDTLEPLEADEHGIRLISNLPPEVLCHEALSQLGLAL SNIIHLNERQQQGDTIMTAQANIGVIGLAAMGSNLARNLAHHGNTVALFNRHYSRTEKLLAEHGTEGNFIPAKTMEEFAA SLQRPRTAIIMVKAGAPTDAVIKQLEEAFEPGDIIVDGGNSYFKDTIKREKEVRAAGFHFVGCGVSGGEEGALNGPSLMP GGTAESWKTLGPILESIAAKVDGEPCVTHIGTDGAGHFVKMVHNGIEYADMQVIGEAYDILRRGLGLSPEAIGDVFADWN KGDLDSYLIEITADILHEKDERTGKPFVDVVVDRAGMKGTGTWTVQTALEFGSPVTGIGEAVFARALSSHPELRQAAQDS APAGPNNAITVGDQATFIEDVRRALLASKIIAYSQGLNEIEDGAKQYGWNIDLGAVAKIWRGGCIIRAKFLNRITDAYTN GHPAALALDPYFAKFLADAQESWRRVIKAAIDAGIPTPVFSSSLAYYDGLRSKRLPTALTQAQRDFFGAHTYGRVDTPGV FHKLWAEQNRPEEQQA >Mature_655_residues GVTGTGKTTMAQELVNELGWPYAEADDFHPQANIDKMASGHPLTDEDRWPWLRSLRDWITEQAGKGANTIVTCSALKRAY RDILREANAQVVFVELDLDKTDIAERMTQREHFMPVELLQSQIDTLEPLEADEHGIRLISNLPPEVLCHEALSQLGLALS NIIHLNERQQQGDTIMTAQANIGVIGLAAMGSNLARNLAHHGNTVALFNRHYSRTEKLLAEHGTEGNFIPAKTMEEFAAS LQRPRTAIIMVKAGAPTDAVIKQLEEAFEPGDIIVDGGNSYFKDTIKREKEVRAAGFHFVGCGVSGGEEGALNGPSLMPG GTAESWKTLGPILESIAAKVDGEPCVTHIGTDGAGHFVKMVHNGIEYADMQVIGEAYDILRRGLGLSPEAIGDVFADWNK GDLDSYLIEITADILHEKDERTGKPFVDVVVDRAGMKGTGTWTVQTALEFGSPVTGIGEAVFARALSSHPELRQAAQDSA PAGPNNAITVGDQATFIEDVRRALLASKIIAYSQGLNEIEDGAKQYGWNIDLGAVAKIWRGGCIIRAKFLNRITDAYTNG HPAALALDPYFAKFLADAQESWRRVIKAAIDAGIPTPVFSSSLAYYDGLRSKRLPTALTQAQRDFFGAHTYGRVDTPGVF HKLWAEQNRPEEQQA
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=470, Percent_Identity=48.936170212766, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI299758445, Length=158, Percent_Identity=42.4050632911392, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI1788341, Length=469, Percent_Identity=52.4520255863539, Blast_Score=503, Evalue=1e-143, Organism=Escherichia coli, GI1790719, Length=138, Percent_Identity=46.3768115942029, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI87082265, Length=141, Percent_Identity=39.7163120567376, Blast_Score=115, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17542558, Length=472, Percent_Identity=49.364406779661, Blast_Score=464, Evalue=1e-131, Organism=Caenorhabditis elegans, GI25146487, Length=143, Percent_Identity=40.5594405594406, Blast_Score=111, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321695, Length=457, Percent_Identity=50.7658643326039, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321977, Length=456, Percent_Identity=51.7543859649123, Blast_Score=439, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6320454, Length=137, Percent_Identity=39.4160583941606, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI24639279, Length=469, Percent_Identity=47.1215351812367, Blast_Score=415, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 71499; Mature: 71368
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTGTGKTTMAQELVNELGWPYAEADDFHPQANIDKMASGHPLTDEDRWPWLRSLRDWI CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH TEQAGKGANTIVTCSALKRAYRDILREANAQVVFVELDLDKTDIAERMTQREHFMPVELL HHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHH QSQIDTLEPLEADEHGIRLISNLPPEVLCHEALSQLGLALSNIIHLNERQQQGDTIMTAQ HHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEE ANIGVIGLAAMGSNLARNLAHHGNTVALFNRHYSRTEKLLAEHGTEGNFIPAKTMEEFAA CCCCEEEHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SLQRPRTAIIMVKAGAPTDAVIKQLEEAFEPGDIIVDGGNSYFKDTIKREKEVRAAGFHF HHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCEEE VGCGVSGGEEGALNGPSLMPGGTAESWKTLGPILESIAAKVDGEPCVTHIGTDGAGHFVK EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH MVHNGIEYADMQVIGEAYDILRRGLGLSPEAIGDVFADWNKGDLDSYLIEITADILHEKD HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH ERTGKPFVDVVVDRAGMKGTGTWTVQTALEFGSPVTGIGEAVFARALSSHPELRQAAQDS HCCCCCHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCC APAGPNNAITVGDQATFIEDVRRALLASKIIAYSQGLNEIEDGAKQYGWNIDLGAVAKIW CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH RGGCIIRAKFLNRITDAYTNGHPAALALDPYFAKFLADAQESWRRVIKAAIDAGIPTPVF CCCCEEHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SSSLAYYDGLRSKRLPTALTQAQRDFFGAHTYGRVDTPGVFHKLWAEQNRPEEQQA HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHCCC >Mature Secondary Structure GVTGTGKTTMAQELVNELGWPYAEADDFHPQANIDKMASGHPLTDEDRWPWLRSLRDWI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH TEQAGKGANTIVTCSALKRAYRDILREANAQVVFVELDLDKTDIAERMTQREHFMPVELL HHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHH QSQIDTLEPLEADEHGIRLISNLPPEVLCHEALSQLGLALSNIIHLNERQQQGDTIMTAQ HHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEE ANIGVIGLAAMGSNLARNLAHHGNTVALFNRHYSRTEKLLAEHGTEGNFIPAKTMEEFAA CCCCEEEHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SLQRPRTAIIMVKAGAPTDAVIKQLEEAFEPGDIIVDGGNSYFKDTIKREKEVRAAGFHF HHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCEEE VGCGVSGGEEGALNGPSLMPGGTAESWKTLGPILESIAAKVDGEPCVTHIGTDGAGHFVK EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH MVHNGIEYADMQVIGEAYDILRRGLGLSPEAIGDVFADWNKGDLDSYLIEITADILHEKD HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH ERTGKPFVDVVVDRAGMKGTGTWTVQTALEFGSPVTGIGEAVFARALSSHPELRQAAQDS HCCCCCHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCC APAGPNNAITVGDQATFIEDVRRALLASKIIAYSQGLNEIEDGAKQYGWNIDLGAVAKIW CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHH RGGCIIRAKFLNRITDAYTNGHPAALALDPYFAKFLADAQESWRRVIKAAIDAGIPTPVF CCCCEEHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SSSLAYYDGLRSKRLPTALTQAQRDFFGAHTYGRVDTPGVFHKLWAEQNRPEEQQA HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]