| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691560
Identifier: 213691560
GI number: 213691560
Start: 762751
End: 764283
Strand: Reverse
Name: 213691560
Synonym: Blon_0661
Alternate gene names: NA
Gene position: 764283-762751 (Counterclockwise)
Preceding gene: 213691563
Following gene: 213691559
Centisome position: 26.98
GC content: 52.84
Gene sequence:
>1533_bases ATGGCAACGAACGCCTTACATTGGCCTTACAAGGCACATCCAATTAACATTAAACGCGGAATTTACTACGGCATGCTCGA CTTGATGGGCGGCGGCTGGAACAATATCGTCTCCGGCGTTATCTTCGCCTACCTGACACTGGCTCAGGGTTTCAATCCCG TCATCGCTGGCAGCATCGCAGCAGCAGGCCGTATCGTGGACTGCATCTGGAATCTTTTCCTTGGCCTCATCACCGATAAT TTCTACACGACCAAGCTCGGACAGAAGTTCGGACGCCGTCATTTCTTCCTGGTGACAGGTCTTATCCTCTTCACCTGTGT GTTCCCGCTATTCTGGATTTCGTCCACTAGCTGGCTGTACTACCTTGCGGTCTATGTCGCGATGGAGATCATCATCGCCA TGCTGATCGTCCCGTGGGAGTGCCTGCCTACGGAAATGACTCGCGATTACAAGGAACGTACCGTGCTGTCCGGTTCTCGT ATGGTCATTTCCTCAACCGGAACTGCAATCGTGTTCATTATCCTTGCTGTGCTTAAGCAGGCGAACAACCCCAACGCATA CCTCGTCGCAGGCATCGCTTGGACCATCCTGTTCGTCATCGCCATCGCCATCTCCACCTTCGGCACCTGGGAACGCCCAA TTACCGACGAGTTCATTGAGGAACATACAAACCAGCCTAAGGTGAAGATCAGCGACTTCATCAAGAATTCCATTCACGAA TACGCAGAGACCTTCCATAACAAGGCATTCCGCACCCATCTTGCGGTGTACCTGTTGTCCTTCACCGGCAAAGATTTGTT TTCCACCTTGCTACCGACTTTCATTGTGTGCTGCATTACCGGTGCCGGAGAAAGCTGGCCTTGGACGCTCCAAGCTCTAT CCATCGTCGGTATTCCGGTGACCATCGTCGCAACGAAGCTCATGGTGGTGAAGGGCCCGAGGTTCATTTTCCGTCTGAGC TATATTAGCATCATCGCGGCAATGGTAGTCTACATCGCGGTCTACCTGCTGAATATTCACAACCCGTTCTGGATTTTCAT CATCGCTTCGCTAGTCTACCAGTGCGGTCGAGCCCTGCTGGAATTCACCCCTTGGAACCTGTTCCCGTTCATGCCGGATG TTGATTACATCATGACGCGTGGCGACCGTGCCGGTCTGTACGCATCCGTGATGACCTTCTTCCGTAAGTCCACTGGAGCA ATCGCCACTTGGATCGCCGGCATTCTACTGGAGTTCACAGGCTATAACTCCGCGACTATGAAGAACTACGAGACCACCCC AGCTCAGGTACGTTTCAGTATCACGCTCATCTTCTTCTTGGGCACCGTGATGCTGATTGCGTATGCTCTGTGGCTCTCCA GGCACATCTACCTCGATGCCGATACGCACGCCGTACTGAAGAGCGAAATCGAGCGTCTTGAAAATGGCGGAGATAAGAAG GATGTGTCCGATGAGGCGCGTCTGGTCTGCGAGGAACTGACCGGACATCCTTATGAATCCCTGTGGCCGGAGACCTCTTC CGTCAAGAAGTGA
Upstream 100 bases:
>100_bases TCCTTATATACATTGTGGTTGTTACCTTTTCCGCACAGCCGTTTAAAACTCACAAAGATGACGAGAAAAACGGTAGTGCA ACACAAAGAAAGACAAAAAC
Downstream 100 bases:
>100_bases TTCCCTCTCCACTTGAAGATTGATATAAGAAGGTGGTAGGTAAAAAATGAACCGCACCCCGATTGTTGGATTGAGGAAAT TCAGATTCGATAATCGGAGG
Product: Na-galactoside symporter
Products: NA
Alternate protein names: Sugar Transporter; Facilitator Superfamily Transporter; Na-Galactoside Symporter; Sugar Transporter Subfamily; Sugar Symporter; Olgogalacturonide Transporter; Melibiose Carrier Protein; SodiumGalactoside Symporter Protein; Rhamnogalacturonide Transporter RhiT; NaGalactoside Symporter Family Permease; Na+/Melibiose Symporter; SugarCation Symporter Family Protein; Glycoside/Pentoside/HexuronideCation Symporter GPH Family; Sugar Transport Symporter; Facilitator Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MATNALHWPYKAHPINIKRGIYYGMLDLMGGGWNNIVSGVIFAYLTLAQGFNPVIAGSIAAAGRIVDCIWNLFLGLITDN FYTTKLGQKFGRRHFFLVTGLILFTCVFPLFWISSTSWLYYLAVYVAMEIIIAMLIVPWECLPTEMTRDYKERTVLSGSR MVISSTGTAIVFIILAVLKQANNPNAYLVAGIAWTILFVIAIAISTFGTWERPITDEFIEEHTNQPKVKISDFIKNSIHE YAETFHNKAFRTHLAVYLLSFTGKDLFSTLLPTFIVCCITGAGESWPWTLQALSIVGIPVTIVATKLMVVKGPRFIFRLS YISIIAAMVVYIAVYLLNIHNPFWIFIIASLVYQCGRALLEFTPWNLFPFMPDVDYIMTRGDRAGLYASVMTFFRKSTGA IATWIAGILLEFTGYNSATMKNYETTPAQVRFSITLIFFLGTVMLIAYALWLSRHIYLDADTHAVLKSEIERLENGGDKK DVSDEARLVCEELTGHPYESLWPETSSVKK
Sequences:
>Translated_510_residues MATNALHWPYKAHPINIKRGIYYGMLDLMGGGWNNIVSGVIFAYLTLAQGFNPVIAGSIAAAGRIVDCIWNLFLGLITDN FYTTKLGQKFGRRHFFLVTGLILFTCVFPLFWISSTSWLYYLAVYVAMEIIIAMLIVPWECLPTEMTRDYKERTVLSGSR MVISSTGTAIVFIILAVLKQANNPNAYLVAGIAWTILFVIAIAISTFGTWERPITDEFIEEHTNQPKVKISDFIKNSIHE YAETFHNKAFRTHLAVYLLSFTGKDLFSTLLPTFIVCCITGAGESWPWTLQALSIVGIPVTIVATKLMVVKGPRFIFRLS YISIIAAMVVYIAVYLLNIHNPFWIFIIASLVYQCGRALLEFTPWNLFPFMPDVDYIMTRGDRAGLYASVMTFFRKSTGA IATWIAGILLEFTGYNSATMKNYETTPAQVRFSITLIFFLGTVMLIAYALWLSRHIYLDADTHAVLKSEIERLENGGDKK DVSDEARLVCEELTGHPYESLWPETSSVKK >Mature_509_residues ATNALHWPYKAHPINIKRGIYYGMLDLMGGGWNNIVSGVIFAYLTLAQGFNPVIAGSIAAAGRIVDCIWNLFLGLITDNF YTTKLGQKFGRRHFFLVTGLILFTCVFPLFWISSTSWLYYLAVYVAMEIIIAMLIVPWECLPTEMTRDYKERTVLSGSRM VISSTGTAIVFIILAVLKQANNPNAYLVAGIAWTILFVIAIAISTFGTWERPITDEFIEEHTNQPKVKISDFIKNSIHEY AETFHNKAFRTHLAVYLLSFTGKDLFSTLLPTFIVCCITGAGESWPWTLQALSIVGIPVTIVATKLMVVKGPRFIFRLSY ISIIAAMVVYIAVYLLNIHNPFWIFIIASLVYQCGRALLEFTPWNLFPFMPDVDYIMTRGDRAGLYASVMTFFRKSTGAI ATWIAGILLEFTGYNSATMKNYETTPAQVRFSITLIFFLGTVMLIAYALWLSRHIYLDADTHAVLKSEIERLENGGDKKD VSDEARLVCEELTGHPYESLWPETSSVKK
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57498; Mature: 57367
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNALHWPYKAHPINIKRGIYYGMLDLMGGGWNNIVSGVIFAYLTLAQGFNPVIAGSIA CCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAGRIVDCIWNLFLGLITDNFYTTKLGQKFGRRHFFLVTGLILFTCVFPLFWISSTSWLY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH YLAVYVAMEIIIAMLIVPWECLPTEMTRDYKERTVLSGSRMVISSTGTAIVFIILAVLKQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC ANNPNAYLVAGIAWTILFVIAIAISTFGTWERPITDEFIEEHTNQPKVKISDFIKNSIHE CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHH YAETFHNKAFRTHLAVYLLSFTGKDLFSTLLPTFIVCCITGAGESWPWTLQALSIVGIPV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH TIVATKLMVVKGPRFIFRLSYISIIAAMVVYIAVYLLNIHNPFWIFIIASLVYQCGRALL HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EFTPWNLFPFMPDVDYIMTRGDRAGLYASVMTFFRKSTGAIATWIAGILLEFTGYNSATM HCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC KNYETTPAQVRFSITLIFFLGTVMLIAYALWLSRHIYLDADTHAVLKSEIERLENGGDKK CCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCCC DVSDEARLVCEELTGHPYESLWPETSSVKK CCCHHHHHHHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure ATNALHWPYKAHPINIKRGIYYGMLDLMGGGWNNIVSGVIFAYLTLAQGFNPVIAGSIA CCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAGRIVDCIWNLFLGLITDNFYTTKLGQKFGRRHFFLVTGLILFTCVFPLFWISSTSWLY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH YLAVYVAMEIIIAMLIVPWECLPTEMTRDYKERTVLSGSRMVISSTGTAIVFIILAVLKQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC ANNPNAYLVAGIAWTILFVIAIAISTFGTWERPITDEFIEEHTNQPKVKISDFIKNSIHE CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHH YAETFHNKAFRTHLAVYLLSFTGKDLFSTLLPTFIVCCITGAGESWPWTLQALSIVGIPV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH TIVATKLMVVKGPRFIFRLSYISIIAAMVVYIAVYLLNIHNPFWIFIIASLVYQCGRALL HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EFTPWNLFPFMPDVDYIMTRGDRAGLYASVMTFFRKSTGAIATWIAGILLEFTGYNSATM HCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC KNYETTPAQVRFSITLIFFLGTVMLIAYALWLSRHIYLDADTHAVLKSEIERLENGGDKK CCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCCC DVSDEARLVCEELTGHPYESLWPETSSVKK CCCHHHHHHHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA