| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691505
Identifier: 213691505
GI number: 213691505
Start: 685903
End: 687015
Strand: Reverse
Name: 213691505
Synonym: Blon_0605
Alternate gene names: NA
Gene position: 687015-685903 (Counterclockwise)
Preceding gene: 213691508
Following gene: 213691503
Centisome position: 24.25
GC content: 58.85
Gene sequence:
>1113_bases ATGGCAAAGGCACGGAGCACGACCACAGGCGCAAGCGTACGAGCCCGCGCCACTTCCAAGCCACGCTCTGCCAAAGCCAC GGCGCGCCCAGTATCCAAGTCCGCAGTAAGGCCACGTAAACGGCACCATCTGCTTGGTTTTCTTGCCGCGATATTCGCCC TTCTTGCCCTTGCCGGTACTGCCGCCCGCGCGCTACCTGCCGATTTGCAGGAACTGCCGTTTGTGCCGATTGTGGTATCG GCAACGCCCTGGTTCATGTTGCTTGGTTTGATCGCCCTACTGTTGGCCATCGTGTCGCGACGTATCCTTGCCGCATTGAT CGCCGCTGCCGCAATCGCGTGCAATGGCTATTGGCAGTATCCGTTCTTCTACTCAGCCGATCCGCTTTCCCAAGCCGCGC AGAACGCCGTGGCCGTAGCCTCCCCCAACACCAGCGACGCCTATGCGCGCGTCATGACCTTCAATGTGTACAAGGGGCAG GCCGATCCGCAAGCCATCGTCGAGCTGGTCCGCGATCAGCGCGTCGAAGTGCTTGCTTTGCAGGAGACCACCGAGGATTT CGTCAAAAAACTCAACGAGGCTGGTATTGAGCACTATCTGCCGTATGCGCAGGTCTCATCGTCTGACGGCGTATTCGGTA ACGGCCTCTGGTCGGCCACGCCACTTGCCGATCCGGCCGACGATGACGTGAATTCCAGCGCCTCATTCATGCCCGGCGGC ACGGTGGATATGGGTGGCCAGCAGATTCGATTCATATCCGTGCACACCACTGCACCTGTACCGGGCTATTGGCGGCAGTG GAAGCGATCGCTGGATGAGTTGGGTCTGATGCGCAGGCATACGGATACACGGTATATTTTCATGGGCGATTTCAACGCCA CTTACGATCACACACCATTCCGTGATTTTCTTGGCGACCGGTTCGTGGATGCCGCACGTGAATCCGGACATGGGTTTACG TTCTCATGGCCCACGAACCGTGCGACTGTGCCAATGTTCGCCGGTATTGACCACGTGGTGCTTGATCAGGGCATGAAGGC CGGGCAATGCAAGGTGGTCAAAGTCGAGGGCTCCGATCATGCGGCGTTGTTGGTGACTGTGGCGGTTGGGTGA
Upstream 100 bases:
>100_bases GCGCATGGCGAAAAGACACCGAAAGACAAGCCGCACACGGTACAGTGGCAAATCGCACGAAAAGCAAGGTAACGACAGGC GAGCCAAAAGAAAGGGCAGT
Downstream 100 bases:
>100_bases TTTCGTATTCCTCGGCCAACCGCATGCACTGGGACACGGCTTCCAGAATCGCCTCGATGCCGGACTTCTTGATTGAGCCG TCGTCCTTTAAATACTTCAT
Product: Endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Integral Membrane Protein; Endonuclease/Exonuclease/Phosphatase Family Protein; Phosphatase; Endonuclease/CDSuclease/Phosphatase; Metal-Dependent Hydrolase-Like Protein; Transmembrane Protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MAKARSTTTGASVRARATSKPRSAKATARPVSKSAVRPRKRHHLLGFLAAIFALLALAGTAARALPADLQELPFVPIVVS ATPWFMLLGLIALLLAIVSRRILAALIAAAAIACNGYWQYPFFYSADPLSQAAQNAVAVASPNTSDAYARVMTFNVYKGQ ADPQAIVELVRDQRVEVLALQETTEDFVKKLNEAGIEHYLPYAQVSSSDGVFGNGLWSATPLADPADDDVNSSASFMPGG TVDMGGQQIRFISVHTTAPVPGYWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFT FSWPTNRATVPMFAGIDHVVLDQGMKAGQCKVVKVEGSDHAALLVTVAVG
Sequences:
>Translated_370_residues MAKARSTTTGASVRARATSKPRSAKATARPVSKSAVRPRKRHHLLGFLAAIFALLALAGTAARALPADLQELPFVPIVVS ATPWFMLLGLIALLLAIVSRRILAALIAAAAIACNGYWQYPFFYSADPLSQAAQNAVAVASPNTSDAYARVMTFNVYKGQ ADPQAIVELVRDQRVEVLALQETTEDFVKKLNEAGIEHYLPYAQVSSSDGVFGNGLWSATPLADPADDDVNSSASFMPGG TVDMGGQQIRFISVHTTAPVPGYWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFT FSWPTNRATVPMFAGIDHVVLDQGMKAGQCKVVKVEGSDHAALLVTVAVG >Mature_369_residues AKARSTTTGASVRARATSKPRSAKATARPVSKSAVRPRKRHHLLGFLAAIFALLALAGTAARALPADLQELPFVPIVVSA TPWFMLLGLIALLLAIVSRRILAALIAAAAIACNGYWQYPFFYSADPLSQAAQNAVAVASPNTSDAYARVMTFNVYKGQA DPQAIVELVRDQRVEVLALQETTEDFVKKLNEAGIEHYLPYAQVSSSDGVFGNGLWSATPLADPADDDVNSSASFMPGGT VDMGGQQIRFISVHTTAPVPGYWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTF SWPTNRATVPMFAGIDHVVLDQGMKAGQCKVVKVEGSDHAALLVTVAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40073; Mature: 39942
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKARSTTTGASVRARATSKPRSAKATARPVSKSAVRPRKRHHLLGFLAAIFALLALAGT CCCCCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AARALPADLQELPFVPIVVSATPWFMLLGLIALLLAIVSRRILAALIAAAAIACNGYWQY HHHHCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC PFFYSADPLSQAAQNAVAVASPNTSDAYARVMTFNVYKGQADPQAIVELVRDQRVEVLAL CEEECCCHHHHHHHCEEEEECCCCCHHEEEEEEEEEECCCCCHHHHHHHHHHCCEEEEEE QETTEDFVKKLNEAGIEHYLPYAQVSSSDGVFGNGLWSATPLADPADDDVNSSASFMPGG HHHHHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVDMGGQQIRFISVHTTAPVPGYWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPF CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCH RDFLGDRFVDAARESGHGFTFSWPTNRATVPMFAGIDHVVLDQGMKAGQCKVVKVEGSDH HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEEECCCC AALLVTVAVG EEEEEEEECC >Mature Secondary Structure AKARSTTTGASVRARATSKPRSAKATARPVSKSAVRPRKRHHLLGFLAAIFALLALAGT CCCCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AARALPADLQELPFVPIVVSATPWFMLLGLIALLLAIVSRRILAALIAAAAIACNGYWQY HHHHCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC PFFYSADPLSQAAQNAVAVASPNTSDAYARVMTFNVYKGQADPQAIVELVRDQRVEVLAL CEEECCCHHHHHHHCEEEEECCCCCHHEEEEEEEEEECCCCCHHHHHHHHHHCCEEEEEE QETTEDFVKKLNEAGIEHYLPYAQVSSSDGVFGNGLWSATPLADPADDDVNSSASFMPGG HHHHHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVDMGGQQIRFISVHTTAPVPGYWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPF CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCH RDFLGDRFVDAARESGHGFTFSWPTNRATVPMFAGIDHVVLDQGMKAGQCKVVKVEGSDH HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEEECCCC AALLVTVAVG EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA