| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is trmB
Identifier: 213691442
GI number: 213691442
Start: 603713
End: 604573
Strand: Reverse
Name: trmB
Synonym: Blon_0537
Alternate gene names: 213691442
Gene position: 604573-603713 (Counterclockwise)
Preceding gene: 213691444
Following gene: 213691440
Centisome position: 21.34
GC content: 65.04
Gene sequence:
>861_bases ATGACCGATCCCGAATCCACAGCAATCGATTCCGTCGCCGCGATGGCCACAGACCACACCGAGGCACCGGCGCACCCCTT GCACAAGGTGCTCTCCTTCGTACGCCGCTCCGGACGTTTGGACGATCGCCTGCAGCGCGCATGGGACAACTATGCCGGCA CATATCTGTTGGATATTGCGGCCGGCAATCTGCTGGACGTGCGCGAAGGCGTCACGCTCGACCGCGCGCTCGTGGAGTCC GCATGGGGCAACGACAATCCACTCATTGTGGAAATCGGCACTGGACAGGGTGAGAACGTGGTGGCCGCAGCCGCGGCCCA TCCGGAGACGAACTTCCTTGCCCTAGAGGTCTATGACCCCGGTGTGGCCCACACGCTGCTGCTCGCCGGCAAGCAGGGGC TGACCAACATTCGCGTGGCCCAGGTCAATGCGCCCGAGCTGTTCAAGGTCACCGCGCCCGGCACCGCAGCCGAAGTATGG ACCTTCTTCCCCGACCCCTGGCCCAAGAAGAAGCACCACAAGCGCCGCATCGTGCAGGAGGCCATGGCCGGCGACATCCA TCGCGCACTGGCCGCAGACGGCGTCTGGCGCATCGCCACCGACATCGAGGACTATGCCCTGCACGTGCACGAGGTGATGG ACGGACTCGACGGTTGGAAGAACCTGGGCAGCGTAACCGTCAGCCTCCCGCTGGAGCACGTGGGCAAGGGCAACGCCGAT CTGGCCGCCGACATGCCGCACGCCGACTTCACCGAATCCGAGCGGTTCGAGGGCCGCGTGCTCACCAACTTCGAGAAGAA GGGCCTGGCCGCCGGCCGCGTGATTCACGACTTCACCTATCAGGCCGTCGCCCTGCACTGA
Upstream 100 bases:
>100_bases TGATATGGTGGTTGGTATCGCACACCACCTACCTAATGAACGCCAAATCGACCTAATGAATGAACAGCGGTGCGGCGCAC AAGGAAAATCCGAGGAATAT
Downstream 100 bases:
>100_bases TTGCGACACGCCGAAATACCGTCGATTTGCATAACCGAACAATCTCCCGTAAAGTAACTCGAGTTGTTCGCCCCCATCGT CTAACGGTTAGGACACCAGA
Product: tRNA (guanine-N(7)-)-methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTDPESTAIDSVAAMATDHTEAPAHPLHKVLSFVRRSGRLDDRLQRAWDNYAGTYLLDIAAGNLLDVREGVTLDRALVES AWGNDNPLIVEIGTGQGENVVAAAAAHPETNFLALEVYDPGVAHTLLLAGKQGLTNIRVAQVNAPELFKVTAPGTAAEVW TFFPDPWPKKKHHKRRIVQEAMAGDIHRALAADGVWRIATDIEDYALHVHEVMDGLDGWKNLGSVTVSLPLEHVGKGNAD LAADMPHADFTESERFEGRVLTNFEKKGLAAGRVIHDFTYQAVALH
Sequences:
>Translated_286_residues MTDPESTAIDSVAAMATDHTEAPAHPLHKVLSFVRRSGRLDDRLQRAWDNYAGTYLLDIAAGNLLDVREGVTLDRALVES AWGNDNPLIVEIGTGQGENVVAAAAAHPETNFLALEVYDPGVAHTLLLAGKQGLTNIRVAQVNAPELFKVTAPGTAAEVW TFFPDPWPKKKHHKRRIVQEAMAGDIHRALAADGVWRIATDIEDYALHVHEVMDGLDGWKNLGSVTVSLPLEHVGKGNAD LAADMPHADFTESERFEGRVLTNFEKKGLAAGRVIHDFTYQAVALH >Mature_285_residues TDPESTAIDSVAAMATDHTEAPAHPLHKVLSFVRRSGRLDDRLQRAWDNYAGTYLLDIAAGNLLDVREGVTLDRALVESA WGNDNPLIVEIGTGQGENVVAAAAAHPETNFLALEVYDPGVAHTLLLAGKQGLTNIRVAQVNAPELFKVTAPGTAAEVWT FFPDPWPKKKHHKRRIVQEAMAGDIHRALAADGVWRIATDIEDYALHVHEVMDGLDGWKNLGSVTVSLPLEHVGKGNADL AADMPHADFTESERFEGRVLTNFEKKGLAAGRVIHDFTYQAVALH
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family
Homologues:
Organism=Escherichia coli, GI1789330, Length=259, Percent_Identity=33.976833976834, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRMB_BIFLI (B7GP38)
Other databases:
- EMBL: CP001095 - RefSeq: YP_002322028.1 - ProteinModelPortal: B7GP38 - GeneID: 7053197 - GenomeReviews: CP001095_GR - KEGG: bln:Blon_0537 - HOGENOM: HBG322782 - ProtClustDB: CLSK573176 - HAMAP: MF_01057 - InterPro: IPR003358 - PANTHER: PTHR23417:SF1 - TIGRFAMs: TIGR00091
Pfam domain/function: PF02390 Methyltransf_4
EC number: =2.1.1.33
Molecular weight: Translated: 31140; Mature: 31009
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: BINDING 91-91 BINDING 116-116 BINDING 143-143 BINDING 165-165 BINDING 169-169 BINDING 201-201
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPESTAIDSVAAMATDHTEAPAHPLHKVLSFVRRSGRLDDRLQRAWDNYAGTYLLDIA CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEC AGNLLDVREGVTLDRALVESAWGNDNPLIVEIGTGQGENVVAAAAAHPETNFLALEVYDP CCCEEEHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEECC GVAHTLLLAGKQGLTNIRVAQVNAPELFKVTAPGTAAEVWTFFPDPWPKKKHHKRRIVQE CHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHHEEECCCCCCCHHHHHHHHHHH AMAGDIHRALAADGVWRIATDIEDYALHVHEVMDGLDGWKNLGSVTVSLPLEHVGKGNAD HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCC LAADMPHADFTESERFEGRVLTNFEKKGLAAGRVIHDFTYQAVALH EECCCCCCCCCCCCCCCCCEEECHHHCCCHHCHHHHHCCCEEEEEC >Mature Secondary Structure TDPESTAIDSVAAMATDHTEAPAHPLHKVLSFVRRSGRLDDRLQRAWDNYAGTYLLDIA CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEC AGNLLDVREGVTLDRALVESAWGNDNPLIVEIGTGQGENVVAAAAAHPETNFLALEVYDP CCCEEEHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEECC GVAHTLLLAGKQGLTNIRVAQVNAPELFKVTAPGTAAEVWTFFPDPWPKKKHHKRRIVQE CHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHHEEECCCCCCCHHHHHHHHHHH AMAGDIHRALAADGVWRIATDIEDYALHVHEVMDGLDGWKNLGSVTVSLPLEHVGKGNAD HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCC LAADMPHADFTESERFEGRVLTNFEKKGLAAGRVIHDFTYQAVALH EECCCCCCCCCCCCCCCCCEEECHHHCCCHHCHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA