| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691416
Identifier: 213691416
GI number: 213691416
Start: 579878
End: 580282
Strand: Direct
Name: 213691416
Synonym: Blon_0511
Alternate gene names: NA
Gene position: 579878-580282 (Clockwise)
Preceding gene: 213691408
Following gene: 213691417
Centisome position: 20.47
GC content: 68.64
Gene sequence:
>405_bases ATGCGAACCACATCCGTATTCAGACTGTCGGCGGCCGCGGCGCTGGCCGCCGCGCTGGCCGCGCCATTGTCGGCATGCGG CCAACAGCAGTCGTCGCAGTCATCCGGCGCGCCCTCCGCGACGACGTCGCAGGACGCGGCGCCGAAGACCGACAGCCAGG GCGGCGACGCGCCGCAGGGATCGAACCCGGCCTCGAAACAGGCCGCCGAACGATACCGCGACTGTCTCACGGCGGCGGGA GTGCCCGCGCAGATCATGGACGGCAACTGGGTCGTGCTCCAATGGACCGGCGACGGCTCCGGCTCGGTGTCCTCGGGGTC CACGGACGGTGACCGGGACAAGGCCATCAAGGAATGCCAAGCCAAGGTGCCCGACTACCACGATCCCGACTTCAACACCA AGTAA
Upstream 100 bases:
>100_bases CCCATCGCACACGGAGAGCCGGCTGTAATGGGCATCGTCCGGCAACCGCCGGGCCAAAGCATCGCCCCGGCAGCGGCGAA CCCATGCAAGGGAGGAACAC
Downstream 100 bases:
>100_bases ACAGACCGCACCAGCCGATGGAAGGGGAAACCACCATGACCACCAGCACATCATCCATCCTCCGCCAAGAAACGCTGCGC AGGGCCGCCGCGCTGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRTTSVFRLSAAAALAAALAAPLSACGQQQSSQSSGAPSATTSQDAAPKTDSQGGDAPQGSNPASKQAAERYRDCLTAAG VPAQIMDGNWVVLQWTGDGSGSVSSGSTDGDRDKAIKECQAKVPDYHDPDFNTK
Sequences:
>Translated_134_residues MRTTSVFRLSAAAALAAALAAPLSACGQQQSSQSSGAPSATTSQDAAPKTDSQGGDAPQGSNPASKQAAERYRDCLTAAG VPAQIMDGNWVVLQWTGDGSGSVSSGSTDGDRDKAIKECQAKVPDYHDPDFNTK >Mature_134_residues MRTTSVFRLSAAAALAAALAAPLSACGQQQSSQSSGAPSATTSQDAAPKTDSQGGDAPQGSNPASKQAAERYRDCLTAAG VPAQIMDGNWVVLQWTGDGSGSVSSGSTDGDRDKAIKECQAKVPDYHDPDFNTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13648; Mature: 13648
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTSVFRLSAAAALAAALAAPLSACGQQQSSQSSGAPSATTSQDAAPKTDSQGGDAPQG CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNPASKQAAERYRDCLTAAGVPAQIMDGNWVVLQWTGDGSGSVSSGSTDGDRDKAIKECQ CCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH AKVPDYHDPDFNTK HHCCCCCCCCCCCC >Mature Secondary Structure MRTTSVFRLSAAAALAAALAAPLSACGQQQSSQSSGAPSATTSQDAAPKTDSQGGDAPQG CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNPASKQAAERYRDCLTAAGVPAQIMDGNWVVLQWTGDGSGSVSSGSTDGDRDKAIKECQ CCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH AKVPDYHDPDFNTK HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA