Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is aspC [H]

Identifier: 213691397

GI number: 213691397

Start: 559622

End: 560806

Strand: Direct

Name: aspC [H]

Synonym: Blon_0491

Alternate gene names: 213691397

Gene position: 559622-560806 (Clockwise)

Preceding gene: 213691396

Following gene: 213691398

Centisome position: 19.76

GC content: 36.54

Gene sequence:

>1185_bases
ATGCTTTTCTCAAAAAGAATTTTAAAATTAAGTGAATCGCCGACTTTGCAATTGAATAATAAGATAAATGGCCTATTGCA
AAAAGGAGAGGATGTAATTAACCTAACCGTAGGCGAGCCAGATTATGTCGAGCCTATTGAATCTAGTTATTCTGCAATAA
AAGCAATTTGTGATCATTTCACTCATTATACTAATTCTTCTGGCATTATTTCTTTGAGAGAAAGTATATGCGCTAAACTC
CTTAAAGAGAATAATCTTGCATATACTCCTGATCAAATTGTAGTTTCTGCGGGTGGAAAGCAAGCACTTTTCAATGCTTT
TTTTGTTTTGCTGAATGGTGGAGAAGAAGTATTAATTCCTACTCCAGCTTGGCCTACTTACAAGCAACAAGTTTTATTGT
GCGGAGGAACACCTGTATTAATTCCGTTAGATGAATCCTCTGAATTTAAATTGACGAAGGAGACTCTTAAAGCTTTCATT
ACGCCTAGAAGTAAAATTCTAGTCCTCAATTCTCCGAGTAATCCAACAGGAGCGACATATTCTGAAGAAGAGTTGGATGA
TCTTGTCTCAATCGTAGAAGAGAACGGACTATATGTTATTAGCGATGAGATATATGAGAGATTGGTATATTCGGGAACAT
ACTCGTCTCCGGTCGGCATAAATGATTATATGAAAAAACATTCAGTTTTAGTTAATGGTTTTTCAAAAGCATTTGGAATG
ACGGGATGGCGTATTGGATATACTGCTGCACCTCTTGATATTTCGATAAAAATTGCAGCGTTTCAAAGTCAAACAACGGC
AAGCATTTCTTCGATTTCTCAAGTGGCAGCAAAATACGCAATTAATAATTTTGATAAAGAACACTTAATTGAGCTTAAAG
AAAAAAGAAATTATTTGATTCATCAATTGGCTGATACTCCGTTAAAGATAGATGTAGAACCCGGAGGTGCGTTTTATTTA
TTCCCCAGAGTCGATTCCGTCTTAGGGAACAGTATATATGGAGAATCCATTGATTCGGTTGAAGCTTTATGCGCTTCTTT
GTTGGAGAGAGAACATGTCGCAATAACGCCGGGATCTTTTTTTGATGCTCCAAACAATGTCCGCATTTCTTATGCAAAAT
CAATGCAGGAAATTTGCGATGCGGCACAGCGGATAAAAAAATATTTCAAGGAGGGCATGAAATGA

Upstream 100 bases:

>100_bases
GTGGCGACAATAGTGAAAATAAGAAAATATTTATCAGAAAAAGAAATATTTTGTGCTGAATTGCATGGATATTGGAGTCA
AAAATAGTCAAAGGATAATT

Downstream 100 bases:

>100_bases
TTAATTTAAAAGATTATAAATGGGTAGTTTCTGAGAGTAGCAAAAAAGCGCAGAGAATGACCATGGCAGGCGATGCGCTG
AGATGTGTTCTTACCTTGAA

Product: aminotransferase, class I and II

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL
LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI
TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM
TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL
FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK

Sequences:

>Translated_394_residues
MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL
LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI
TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM
TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL
FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK
>Mature_394_residues
MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL
LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI
TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM
TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL
FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=317, Percent_Identity=26.813880126183, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI169881279, Length=317, Percent_Identity=26.813880126183, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI56713254, Length=357, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI56713256, Length=315, Percent_Identity=29.2063492063492, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI169881281, Length=227, Percent_Identity=25.9911894273128, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4507369, Length=376, Percent_Identity=23.6702127659574, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI187936925, Length=359, Percent_Identity=26.1838440111421, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI14211921, Length=359, Percent_Identity=26.1838440111421, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI19263340, Length=404, Percent_Identity=23.019801980198, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI215599424, Length=379, Percent_Identity=23.4828496042216, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1786816, Length=379, Percent_Identity=27.4406332453826, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1788627, Length=363, Percent_Identity=26.1707988980716, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788722, Length=376, Percent_Identity=24.7340425531915, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17567663, Length=379, Percent_Identity=25.5936675461741, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI71994472, Length=325, Percent_Identity=28, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71994476, Length=325, Percent_Identity=28, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17567369, Length=337, Percent_Identity=26.7062314540059, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI71981209, Length=340, Percent_Identity=22.3529411764706, Blast_Score=68, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6322401, Length=269, Percent_Identity=26.7657992565056, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6320317, Length=344, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323118, Length=359, Percent_Identity=23.6768802228412, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28573069, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24646114, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI28573067, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI28573065, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI18859735, Length=415, Percent_Identity=22.6506024096386, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24641770, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641760, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641768, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641766, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641764, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45551451, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 43509; Mature: 43509

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHF
CCCHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
THYTNSSGIISLRESICAKLLKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIP
HHHCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHEEEEECCCEEEEE
TPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFITPRSKILVLNSPSNPTGATY
CCCCCCCCCEEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCC
SEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM
CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLI
CCEEECEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HQLADTPLKIDVEPGGAFYLFPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSF
HHHCCCCEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC
FDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHF
CCCHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
THYTNSSGIISLRESICAKLLKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIP
HHHCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHEEEEECCCEEEEE
TPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFITPRSKILVLNSPSNPTGATY
CCCCCCCCCEEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCC
SEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM
CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLI
CCEEECEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HQLADTPLKIDVEPGGAFYLFPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSF
HHHCCCCEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC
FDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]