| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691379
Identifier: 213691379
GI number: 213691379
Start: 543896
End: 545332
Strand: Reverse
Name: 213691379
Synonym: Blon_0473
Alternate gene names: NA
Gene position: 545332-543896 (Counterclockwise)
Preceding gene: 213691380
Following gene: 213691378
Centisome position: 19.25
GC content: 64.86
Gene sequence:
>1437_bases ATGCGTGGCCTGTTGCGTGATTTCAGGGATGCGCCTGTCGTGTGGGGCGCGGTATTGCTGCTGCTGGCAGTGGTGCAGTG CGTGTCGGGCATGGTGATGGTCATGTTGTCGAACGCGAGGATGGCCATGGCGGTTCCGGGGTTGCATGGCAGGGCGGTGA TGTTCTCGATGGAGCTGAGCGGCCCTCCTCTGGTGCCGATGATCGTCGTGGGCATGCTCATGGTGCTTTTGGTGGTCTCC TCGGCCATCCGTCAGCGCCGCCGCGCCCTCGCCTTGATCGCATTGCAGGGTGCCACGCCCGGACAGTTGACGTCGCGCGT CTGCGCGCAGGTGCTGCTGTTGGATGTCGCCGCCACGCTCGTCTCGCTTATCGTCTCGCCGGCGCTGGCACGGGGGCTCT ATCCGTTCGCGACCCGGCAGTTGGAGGCGAACGGGTTGCCGTTTCTGCCGCAGGATGTGACGGGCATGCTGCGGGCGTGG AGTTGCGGTATCGTCTTCGGATTCGCGATGGCCTTGGTCGGCTCGCTGTTGACGGTGCGCGTGGTCGGCGGCATATCGCC GGTCGAGGCGTTGCGCGAGGCGGCGAACCCTCCGAAAACGGTCGGTGTTCCCCGTCTTGTTCTTGCCTGGATCATGTTCG CCGGGGCGTTGGTCTCGCTGGCGGTCGGTCTGCTGAACGTGCGGAAGACATCGATGGCGCGGATGTCGGTGCAGGTCACG TTTTCGTCCATGTCGCCGCTGGCGTACGGCAACATGATCGCGATGCTGCTGTTCACCGTGTCCGTCTGCCTTGCCGGTCC GGCCGTGCTGTCGGCGACGGTGCGCATGTGGACGGCGGTGGTGCGTCTTCCCTGGCCGGCGTGGCGCATCGCATGCCAGC AGGCTCGGGCCAGGGTGTGCGCGTCCTCGTCCACCATCATTCCCTTGGCCGCCGGATTGACGCTGCTCATGTCATATGAG TCGCTCACCTCGACCATCACCGCGTGGACGCGGCTGCTTCCCGCGGGGACGCCGACGGTGGAGGTGCCCGGTTTCGCCCG TATCCTGGCATTGATCGGCACATCGCTGGTCCTGGTGCTGGCGGCGGTGTGCTCGGGCTATCTGATCGCCCAGCGTGGAC GGGAGCTTGACCTCGCGCTAGTAGCCGTCAGCGGTGGAACCCAAGGCCAGCTCAACGCCATCGCCGCCTTGGATGGGCTT ATGATTGTCGTCACCTCGTCCCTGATCGCGTTCGTTCCCAGTCTGCTCGTATCCGTCTCGTTCTCCATCGGCATCTGGTT GTCGTTTGACGTGCTGGTATTCGGCATGCCGTGGCTCCTGTGGCTCGTGGTCGTGCTCTTGCTTGCCGCCATGGCGATGC TTGGTTCGTGGCTCACCGCGCAACGTGGCATTCGCACATCGCCGACGGTCGTCATCGCTCGTGCGGCAGGAGAATAA
Upstream 100 bases:
>100_bases AGGTCGCGGTCCGCTGCGATCGCGTCGCGCGGATGCGTGACGGTGTGTTGGCCGAGGTCGGTTCCGATTCGTCCGGTCTT GATGGGCGGGAGGCGATTTG
Downstream 100 bases:
>100_bases GCACCAAGCGGATATGCATGCGAGTATGTCTGATTGTGAGTCGAGGATATGGGATACGGGCGATGCTCCGCTGGGATTGA GGAAACCGGGCGGCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MRGLLRDFRDAPVVWGAVLLLLAVVQCVSGMVMVMLSNARMAMAVPGLHGRAVMFSMELSGPPLVPMIVVGMLMVLLVVS SAIRQRRRALALIALQGATPGQLTSRVCAQVLLLDVAATLVSLIVSPALARGLYPFATRQLEANGLPFLPQDVTGMLRAW SCGIVFGFAMALVGSLLTVRVVGGISPVEALREAANPPKTVGVPRLVLAWIMFAGALVSLAVGLLNVRKTSMARMSVQVT FSSMSPLAYGNMIAMLLFTVSVCLAGPAVLSATVRMWTAVVRLPWPAWRIACQQARARVCASSSTIIPLAAGLTLLMSYE SLTSTITAWTRLLPAGTPTVEVPGFARILALIGTSLVLVLAAVCSGYLIAQRGRELDLALVAVSGGTQGQLNAIAALDGL MIVVTSSLIAFVPSLLVSVSFSIGIWLSFDVLVFGMPWLLWLVVVLLLAAMAMLGSWLTAQRGIRTSPTVVIARAAGE
Sequences:
>Translated_478_residues MRGLLRDFRDAPVVWGAVLLLLAVVQCVSGMVMVMLSNARMAMAVPGLHGRAVMFSMELSGPPLVPMIVVGMLMVLLVVS SAIRQRRRALALIALQGATPGQLTSRVCAQVLLLDVAATLVSLIVSPALARGLYPFATRQLEANGLPFLPQDVTGMLRAW SCGIVFGFAMALVGSLLTVRVVGGISPVEALREAANPPKTVGVPRLVLAWIMFAGALVSLAVGLLNVRKTSMARMSVQVT FSSMSPLAYGNMIAMLLFTVSVCLAGPAVLSATVRMWTAVVRLPWPAWRIACQQARARVCASSSTIIPLAAGLTLLMSYE SLTSTITAWTRLLPAGTPTVEVPGFARILALIGTSLVLVLAAVCSGYLIAQRGRELDLALVAVSGGTQGQLNAIAALDGL MIVVTSSLIAFVPSLLVSVSFSIGIWLSFDVLVFGMPWLLWLVVVLLLAAMAMLGSWLTAQRGIRTSPTVVIARAAGE >Mature_478_residues MRGLLRDFRDAPVVWGAVLLLLAVVQCVSGMVMVMLSNARMAMAVPGLHGRAVMFSMELSGPPLVPMIVVGMLMVLLVVS SAIRQRRRALALIALQGATPGQLTSRVCAQVLLLDVAATLVSLIVSPALARGLYPFATRQLEANGLPFLPQDVTGMLRAW SCGIVFGFAMALVGSLLTVRVVGGISPVEALREAANPPKTVGVPRLVLAWIMFAGALVSLAVGLLNVRKTSMARMSVQVT FSSMSPLAYGNMIAMLLFTVSVCLAGPAVLSATVRMWTAVVRLPWPAWRIACQQARARVCASSSTIIPLAAGLTLLMSYE SLTSTITAWTRLLPAGTPTVEVPGFARILALIGTSLVLVLAAVCSGYLIAQRGRELDLALVAVSGGTQGQLNAIAALDGL MIVVTSSLIAFVPSLLVSVSFSIGIWLSFDVLVFGMPWLLWLVVVLLLAAMAMLGSWLTAQRGIRTSPTVVIARAAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50369; Mature: 50369
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLLRDFRDAPVVWGAVLLLLAVVQCVSGMVMVMLSNARMAMAVPGLHGRAVMFSMELS CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECC GPPLVPMIVVGMLMVLLVVSSAIRQRRRALALIALQGATPGQLTSRVCAQVLLLDVAATL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH VSLIVSPALARGLYPFATRQLEANGLPFLPQDVTGMLRAWSCGIVFGFAMALVGSLLTVR HHHHHHHHHHHCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGGISPVEALREAANPPKTVGVPRLVLAWIMFAGALVSLAVGLLNVRKTSMARMSVQVT HHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE FSSMSPLAYGNMIAMLLFTVSVCLAGPAVLSATVRMWTAVVRLPWPAWRIACQQARARVC ECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASSSTIIPLAAGLTLLMSYESLTSTITAWTRLLPAGTPTVEVPGFARILALIGTSLVLVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHH AAVCSGYLIAQRGRELDLALVAVSGGTQGQLNAIAALDGLMIVVTSSLIAFVPSLLVSVS HHHHCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIGIWLSFDVLVFGMPWLLWLVVVLLLAAMAMLGSWLTAQRGIRTSPTVVIARAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure MRGLLRDFRDAPVVWGAVLLLLAVVQCVSGMVMVMLSNARMAMAVPGLHGRAVMFSMELS CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECC GPPLVPMIVVGMLMVLLVVSSAIRQRRRALALIALQGATPGQLTSRVCAQVLLLDVAATL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH VSLIVSPALARGLYPFATRQLEANGLPFLPQDVTGMLRAWSCGIVFGFAMALVGSLLTVR HHHHHHHHHHHCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGGISPVEALREAANPPKTVGVPRLVLAWIMFAGALVSLAVGLLNVRKTSMARMSVQVT HHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE FSSMSPLAYGNMIAMLLFTVSVCLAGPAVLSATVRMWTAVVRLPWPAWRIACQQARARVC ECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASSSTIIPLAAGLTLLMSYESLTSTITAWTRLLPAGTPTVEVPGFARILALIGTSLVLVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHH AAVCSGYLIAQRGRELDLALVAVSGGTQGQLNAIAALDGLMIVVTSSLIAFVPSLLVSVS HHHHCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSIGIWLSFDVLVFGMPWLLWLVVVLLLAAMAMLGSWLTAQRGIRTSPTVVIARAAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA