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The map label for this gene is ptrB [H]

Identifier: 213691375

GI number: 213691375

Start: 538285

End: 538878

Strand: Reverse

Name: ptrB [H]

Synonym: Blon_0469

Alternate gene names: 213691375

Gene position: 538878-538285 (Counterclockwise)

Preceding gene: 213691376

Following gene: 213691374

Centisome position: 19.02

GC content: 41.25

Gene sequence:

>594_bases
ATGTTTAAAGCAATAGGACGAATCAAGGGATATTTATACTTTTGGTTAAATAAGTTCATATCTATCAATGATTTTCTCGA
TTGCACTAAAGGATTGATTGCAAATAACTTATGTGACGCCAAACGCATTGGAGCAGCGGGTTCAAGCGCCGGCGCTTTGG
TTGTTCTTTCTGCCGCATTGCGCCGCCTGGATTATTTCAAAATTGTTCAATTATCGCACCCTTTTTTAACACCGGAATTG
ATTCTCACAGACCCCGACAATCCACTTACAATTAGCGATTGGGATGAATTCGGATATCCCTCATCATCTTCTTGCTATGA
CTCGTTTTCACCTTTGGCGCAATTGCGGCGTCTTCCAGCTGATTTTTCTAATCAGGCTCCTGACATTTGGATTACTGCCG
GCAAGAATGATATAAAGGCGCCTCTCTTATATACGGAACAATGGTTGAATTCATATTCGGCTATTGTTCCGTCCGCACAT
AATTCGGTGTTTTTGCAACTGTTAGATGAAGGACATCACAATTCTGATGATTCTTTGACTGGTGGCTGTTTATCAACTAT
ATGGTTACTCGACTCTCTCTTCGACACAGATTGA

Upstream 100 bases:

>100_bases
AGCAGCACCAGCGGTTTCTTCTGCTGATTCATAAAGGTTAAAAATGAGGGGGTGACTCGTTAGGGTCACCCCCTCATTTA
CACCAATAGGAGCGCTTGAA

Downstream 100 bases:

>100_bases
CATCTTTTGATGTCAATCGTCTCTCCGGCATAGACGATTGACTTGTCTTTATGGATACTGTCGGCAGTAGCACTCTCGTA
GGAAGGATTCTCGTCCATGA

Product: Protease II-like protein

Products: NA

Alternate protein names: Oligopeptidase B; Protease II [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MFKAIGRIKGYLYFWLNKFISINDFLDCTKGLIANNLCDAKRIGAAGSSAGALVVLSAALRRLDYFKIVQLSHPFLTPEL
ILTDPDNPLTISDWDEFGYPSSSSCYDSFSPLAQLRRLPADFSNQAPDIWITAGKNDIKAPLLYTEQWLNSYSAIVPSAH
NSVFLQLLDEGHHNSDDSLTGGCLSTIWLLDSLFDTD

Sequences:

>Translated_197_residues
MFKAIGRIKGYLYFWLNKFISINDFLDCTKGLIANNLCDAKRIGAAGSSAGALVVLSAALRRLDYFKIVQLSHPFLTPEL
ILTDPDNPLTISDWDEFGYPSSSSCYDSFSPLAQLRRLPADFSNQAPDIWITAGKNDIKAPLLYTEQWLNSYSAIVPSAH
NSVFLQLLDEGHHNSDDSLTGGCLSTIWLLDSLFDTD
>Mature_197_residues
MFKAIGRIKGYLYFWLNKFISINDFLDCTKGLIANNLCDAKRIGAAGSSAGALVVLSAALRRLDYFKIVQLSHPFLTPEL
ILTDPDNPLTISDWDEFGYPSSSSCYDSFSPLAQLRRLPADFSNQAPDIWITAGKNDIKAPLLYTEQWLNSYSAIVPSAH
NSVFLQLLDEGHHNSDDSLTGGCLSTIWLLDSLFDTD

Specific function: Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues [H]

COG id: COG1770

COG function: function code E; Protease II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002471
- InterPro:   IPR001375
- InterPro:   IPR002470
- InterPro:   IPR004106 [H]

Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]

EC number: =3.4.21.83 [H]

Molecular weight: Translated: 21858; Mature: 21858

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKAIGRIKGYLYFWLNKFISINDFLDCTKGLIANNLCDAKRIGAAGSSAGALVVLSAAL
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH
RRLDYFKIVQLSHPFLTPELILTDPDNPLTISDWDEFGYPSSSSCYDSFSPLAQLRRLPA
HHHHHHHHEECCCCCCCCEEEEECCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCC
DFSNQAPDIWITAGKNDIKAPLLYTEQWLNSYSAIVPSAHNSVFLQLLDEGHHNSDDSLT
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
GGCLSTIWLLDSLFDTD
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKAIGRIKGYLYFWLNKFISINDFLDCTKGLIANNLCDAKRIGAAGSSAGALVVLSAAL
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH
RRLDYFKIVQLSHPFLTPELILTDPDNPLTISDWDEFGYPSSSSCYDSFSPLAQLRRLPA
HHHHHHHHEECCCCCCCCEEEEECCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCC
DFSNQAPDIWITAGKNDIKAPLLYTEQWLNSYSAIVPSAHNSVFLQLLDEGHHNSDDSLT
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
GGCLSTIWLLDSLFDTD
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7629037 [H]