| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691357
Identifier: 213691357
GI number: 213691357
Start: 517757
End: 518965
Strand: Reverse
Name: 213691357
Synonym: Blon_0448
Alternate gene names: NA
Gene position: 518965-517757 (Counterclockwise)
Preceding gene: 213691360
Following gene: 213691355
Centisome position: 18.32
GC content: 25.39
Gene sequence:
>1209_bases ATGAACACTAAAAAATATTTTATAACATTATTTTCTTTTATTATTTTCTCTATATATTTTACTTTGTCAGGTATATTTGT TCCTTTCATTGCTTCTATTCCGCAAAGCAATGGTGTATTTAAAACACTTTCATCACAAAATGATTTTTACAAAATGGTTG ACAATTTTTATGATCCAGATGAATTTTATAATTTTAGAACAGACAATCAAAACATAAATATATTAGCAAACTTCTATAAC ACATTAAATGCATCAAGTAACTTCGATGTTTTAACCTCATTCAATCAGGCTATCGCTGTAGATATAGATGACTTTAATGG AGACCAACGCTTTTATTATAATTCTGATGAATTTATTGATAATAGTCAGTCTCCTACAATAAATATAAAAGCGTTACAAC TTAATCAAAAAGCCTATGAGTTTTATAATATAAAAGTTGAGGGAAATTCCGGAATTGCATGGAATAGTATTTCATATAAA GATGACTCGATTCCTGTTCTATTGGGTTCTGAATATAAATCTTTTTATAAAATCGGAGACATAATTACCGGAAATTATTA TAGTAAAAATACTAATTTTGAAGTTATCGGATTTATAGAAACAGATTGTTCTATAAATTATAAAAATACCTCTAATATCA CTTTGAATACTTATATGCTTATTCCTTACCCTTCCACTCTTTGGGAAGTGGACAAAACTAATTTTCAATTTGAATCATTA TTATACTTTGCTATGATAAATTGTGATTTACTACCATTTGTTGAGGAATCACAAATTTTAAAAAATATAAAGTCTATATC TGACGAAACTGGATTTTCAGACTTTTCTTTAGTTGGTATTGATAACTTTCAAATACAACATATAGAATTACTTTTATTTA TACAAAAGCATCATATACTTTCCATCATTGGTTTTTTGATTATTTTTATTTTACTAAATATACTATGTTTGTATTTATTT AGCCACATTCTAAAATCAATTTATAATCAATCAACCTTACGAAAAAAACATAATAAAATTTTTATGTTGAATATTGTTAT CCCATATGGATCTGCGTTTCTTTTAGGAACGTCTCTTGCAACACTATTTATAAAAAAAATATTGCCTATTAGCATCATTA TTGGAATAATAACCTTGGCTTTAATATATTTGATGAATTATCTTTTTTTATCAAAATTCCTTCATTTTTCCTCAAATCTT CAGCAATAG
Upstream 100 bases:
>100_bases AACGGGTGTTGCACTTTCATTTAGACAACGGGTATTGACTTTTATATGTTTCCTATGATAAGCTTTTTAAATTTACTATA TTCTTTTTAAGGAGTCTTCT
Downstream 100 bases:
>100_bases ACAATAGGGAAAAAAGAGTTATTTAATAACTCCTTTTTCCCTATATATTTTCATTGTTTATATCTTTCCACCACTTATAA ACAGTATGCTTTGCAAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNTKKYFITLFSFIIFSIYFTLSGIFVPFIASIPQSNGVFKTLSSQNDFYKMVDNFYDPDEFYNFRTDNQNINILANFYN TLNASSNFDVLTSFNQAIAVDIDDFNGDQRFYYNSDEFIDNSQSPTINIKALQLNQKAYEFYNIKVEGNSGIAWNSISYK DDSIPVLLGSEYKSFYKIGDIITGNYYSKNTNFEVIGFIETDCSINYKNTSNITLNTYMLIPYPSTLWEVDKTNFQFESL LYFAMINCDLLPFVEESQILKNIKSISDETGFSDFSLVGIDNFQIQHIELLLFIQKHHILSIIGFLIIFILLNILCLYLF SHILKSIYNQSTLRKKHNKIFMLNIVIPYGSAFLLGTSLATLFIKKILPISIIIGIITLALIYLMNYLFLSKFLHFSSNL QQ
Sequences:
>Translated_402_residues MNTKKYFITLFSFIIFSIYFTLSGIFVPFIASIPQSNGVFKTLSSQNDFYKMVDNFYDPDEFYNFRTDNQNINILANFYN TLNASSNFDVLTSFNQAIAVDIDDFNGDQRFYYNSDEFIDNSQSPTINIKALQLNQKAYEFYNIKVEGNSGIAWNSISYK DDSIPVLLGSEYKSFYKIGDIITGNYYSKNTNFEVIGFIETDCSINYKNTSNITLNTYMLIPYPSTLWEVDKTNFQFESL LYFAMINCDLLPFVEESQILKNIKSISDETGFSDFSLVGIDNFQIQHIELLLFIQKHHILSIIGFLIIFILLNILCLYLF SHILKSIYNQSTLRKKHNKIFMLNIVIPYGSAFLLGTSLATLFIKKILPISIIIGIITLALIYLMNYLFLSKFLHFSSNL QQ >Mature_402_residues MNTKKYFITLFSFIIFSIYFTLSGIFVPFIASIPQSNGVFKTLSSQNDFYKMVDNFYDPDEFYNFRTDNQNINILANFYN TLNASSNFDVLTSFNQAIAVDIDDFNGDQRFYYNSDEFIDNSQSPTINIKALQLNQKAYEFYNIKVEGNSGIAWNSISYK DDSIPVLLGSEYKSFYKIGDIITGNYYSKNTNFEVIGFIETDCSINYKNTSNITLNTYMLIPYPSTLWEVDKTNFQFESL LYFAMINCDLLPFVEESQILKNIKSISDETGFSDFSLVGIDNFQIQHIELLLFIQKHHILSIIGFLIIFILLNILCLYLF SHILKSIYNQSTLRKKHNKIFMLNIVIPYGSAFLLGTSLATLFIKKILPISIIIGIITLALIYLMNYLFLSKFLHFSSNL QQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46456; Mature: 46456
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKYFITLFSFIIFSIYFTLSGIFVPFIASIPQSNGVFKTLSSQNDFYKMVDNFYDPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCHH EFYNFRTDNQNINILANFYNTLNASSNFDVLTSFNQAIAVDIDDFNGDQRFYYNSDEFID HHCCCCCCCCCEEEEEEEHHHCCCCCCCHHEECCCCEEEEEEECCCCCCEEEECCHHHCC NSQSPTINIKALQLNQKAYEFYNIKVEGNSGIAWNSISYKDDSIPVLLGSEYKSFYKIGD CCCCCEEEEEEEEECCCEEEEEEEEEECCCCEEECCCCCCCCCCEEEECCCHHHHHHHCC IITGNYYSKNTNFEVIGFIETDCSINYKNTSNITLNTYMLIPYPSTLWEVDKTNFQFESL EEECCEECCCCCEEEEEEEECCCEEEECCCCCEEEEEEEEEECCCHHEECCCCCCHHHHH LYFAMINCDLLPFVEESQILKNIKSISDETGFSDFSLVGIDNFQIQHIELLLFIQKHHIL HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEHHEEEEEHHHHHHHH SIIGFLIIFILLNILCLYLFSHILKSIYNQSTLRKKHNKIFMLNIVIPYGSAFLLGTSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEEEECCCCHHHHHHHHH TLFIKKILPISIIIGIITLALIYLMNYLFLSKFLHFSSNLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNTKKYFITLFSFIIFSIYFTLSGIFVPFIASIPQSNGVFKTLSSQNDFYKMVDNFYDPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCHH EFYNFRTDNQNINILANFYNTLNASSNFDVLTSFNQAIAVDIDDFNGDQRFYYNSDEFID HHCCCCCCCCCEEEEEEEHHHCCCCCCCHHEECCCCEEEEEEECCCCCCEEEECCHHHCC NSQSPTINIKALQLNQKAYEFYNIKVEGNSGIAWNSISYKDDSIPVLLGSEYKSFYKIGD CCCCCEEEEEEEEECCCEEEEEEEEEECCCCEEECCCCCCCCCCEEEECCCHHHHHHHCC IITGNYYSKNTNFEVIGFIETDCSINYKNTSNITLNTYMLIPYPSTLWEVDKTNFQFESL EEECCEECCCCCEEEEEEEECCCEEEECCCCCEEEEEEEEEECCCHHEECCCCCCHHHHH LYFAMINCDLLPFVEESQILKNIKSISDETGFSDFSLVGIDNFQIQHIELLLFIQKHHIL HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEHHEEEEEHHHHHHHH SIIGFLIIFILLNILCLYLFSHILKSIYNQSTLRKKHNKIFMLNIVIPYGSAFLLGTSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEEEEEECCCCHHHHHHHHH TLFIKKILPISIIIGIITLALIYLMNYLFLSKFLHFSSNLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA