Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691346

Identifier: 213691346

GI number: 213691346

Start: 505698

End: 506102

Strand: Direct

Name: 213691346

Synonym: Blon_0437

Alternate gene names: NA

Gene position: 505698-506102 (Clockwise)

Preceding gene: 213691345

Following gene: 213691347

Centisome position: 17.85

GC content: 44.44

Gene sequence:

>405_bases
ATGGTCCAGATAAACGCTGACGGTATGACGAAGCGCAAATCGCTGGCTAGGCGGGTGCTGTTATACGCTATCATCGCATT
TATAACGTCGGCGCTCATTGCGGCTGTCTTGATCATGATTGGTCTCATTCCGCTGAAAAGAAATGGCACAAGTTTGCCGT
GCAACGATTTGGCATCCTACCAAACAACGAAGCAGATATATGTCGAGAGCAGCGCAGCCATTGACAAACTCAAATCAGTA
GGGAAAAGCGTTAAAGTGAACATTAAACACGCCGATTGCCCCTCCCGGATACAGGACAAAGGATATGTCGAAATTACATA
TGGAAACGATATCGAACGTGACAAAATCATGAAGATTCTTAATGATGATGGTTTGGGAATATATACTGTGCTTGTTCGAC
AGTAA

Upstream 100 bases:

>100_bases
TAGTCTCTGCATGTGACCAAAACTACCAAGTAGGCAATCATAACTAATCATTGATTGCTATACCTCGTGAAGTGGAATAG
TGAAAACGCAAGGAGGAATG

Downstream 100 bases:

>100_bases
TTTTTAGTGAGGATATGAAAAAGGAATACTGAAGAATCAGTCACTATGCGCGCCAATTGACTTTTGCCTTGATTGGTAGT
GTTTTTTCGGTTATTCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVQINADGMTKRKSLARRVLLYAIIAFITSALIAAVLIMIGLIPLKRNGTSLPCNDLASYQTTKQIYVESSAAIDKLKSV
GKSVKVNIKHADCPSRIQDKGYVEITYGNDIERDKIMKILNDDGLGIYTVLVRQ

Sequences:

>Translated_134_residues
MVQINADGMTKRKSLARRVLLYAIIAFITSALIAAVLIMIGLIPLKRNGTSLPCNDLASYQTTKQIYVESSAAIDKLKSV
GKSVKVNIKHADCPSRIQDKGYVEITYGNDIERDKIMKILNDDGLGIYTVLVRQ
>Mature_134_residues
MVQINADGMTKRKSLARRVLLYAIIAFITSALIAAVLIMIGLIPLKRNGTSLPCNDLASYQTTKQIYVESSAAIDKLKSV
GKSVKVNIKHADCPSRIQDKGYVEITYGNDIERDKIMKILNDDGLGIYTVLVRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14800; Mature: 14800

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQINADGMTKRKSLARRVLLYAIIAFITSALIAAVLIMIGLIPLKRNGTSLPCNDLASY
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
QTTKQIYVESSAAIDKLKSVGKSVKVNIKHADCPSRIQDKGYVEITYGNDIERDKIMKIL
HHHHHHEECCHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCEEEEEECCCCCHHHHHHHH
NDDGLGIYTVLVRQ
CCCCCEEEEEEEEC
>Mature Secondary Structure
MVQINADGMTKRKSLARRVLLYAIIAFITSALIAAVLIMIGLIPLKRNGTSLPCNDLASY
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
QTTKQIYVESSAAIDKLKSVGKSVKVNIKHADCPSRIQDKGYVEITYGNDIERDKIMKIL
HHHHHHEECCHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCEEEEEECCCCCHHHHHHHH
NDDGLGIYTVLVRQ
CCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA