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The map label for this gene is yvfU [H]

Identifier: 213691342

GI number: 213691342

Start: 501644

End: 502381

Strand: Reverse

Name: yvfU [H]

Synonym: Blon_0433

Alternate gene names: 213691342

Gene position: 502381-501644 (Counterclockwise)

Preceding gene: 213691350

Following gene: 213691341

Centisome position: 17.73

GC content: 53.93

Gene sequence:

>738_bases
GTGACATTGTGGGAAGCTGGCGACCATCCGCAATATCATCAAGACATGAACCAACAAGGCGAAGGAAAAGTGACATTGGG
CATTGTGGACAACGACCAGCTGACGTTGGCGGCATTGTCGAGCATCCTGCGCAGTCTGCCTTGGCTGCACATCCTATGGA
CGACAATCTCAGGCGACGATGCGATTGACAACTGCTTGTCCCCGAGAACGCGTCCGCAAGTGATATTGGTCGATATGTCC
ATGGAGAACACGAGCGGTGCCATGGTATGCAGGACCTTACGCCGTCATTCGCTACCCATCGGAGTAGTATGCATGACCTC
ATTTTCGCTGGGAAGCTATGCTCGCGCAGCCGCCGAAGCCGGAGCTCAGGCGTTGATCTCCAAAACGGACTTACGCATCT
TGTCCAGCGCCGTACGACGCGCATCGATGGGCTCGGCGACGCAATGCGCTGCTGATGAATCAGCACGTTTCACTGATGTG
CCAGACACTGCTTCCAACCTTATTCCAGACTTTACTAAGGCTTCAGATAAGCGTTGGATGAACGGAGATCGACTGTCCGC
ACGGGAGGTTGAAATCCTGCGCATGTACTCCGAAGGACTGGAAACTGAGGAGATTGCGAGGTCTTTGTCCCTAAGCAAGT
TCACCATCGGCACGTATGTCAAACGTGCGGTCGCCAAATTGCATGCACGGAACAGAATCCACGCCATCATCATGTGCGAG
AAACGCGGACTGCTATGA

Upstream 100 bases:

>100_bases
CAACACTGACCGGAACCCGCGTTCGCCGTTCCGGAATCTTTCCGGAACGTCTTCAAGGTATCGCCTTCTTCCGGGACAAT
CCACCGATGTCACTTCATAA

Downstream 100 bases:

>100_bases
ACCATGAAAACACCAAACGGAATGGACTTGCACAGGATCAGAACGACGAAATAGGTACCAGCAGTTGGATGTACATGCGC
GCAATCGCGGTCATGGCAGG

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTLWEAGDHPQYHQDMNQQGEGKVTLGIVDNDQLTLAALSSILRSLPWLHILWTTISGDDAIDNCLSPRTRPQVILVDMS
MENTSGAMVCRTLRRHSLPIGVVCMTSFSLGSYARAAAEAGAQALISKTDLRILSSAVRRASMGSATQCAADESARFTDV
PDTASNLIPDFTKASDKRWMNGDRLSAREVEILRMYSEGLETEEIARSLSLSKFTIGTYVKRAVAKLHARNRIHAIIMCE
KRGLL

Sequences:

>Translated_245_residues
MTLWEAGDHPQYHQDMNQQGEGKVTLGIVDNDQLTLAALSSILRSLPWLHILWTTISGDDAIDNCLSPRTRPQVILVDMS
MENTSGAMVCRTLRRHSLPIGVVCMTSFSLGSYARAAAEAGAQALISKTDLRILSSAVRRASMGSATQCAADESARFTDV
PDTASNLIPDFTKASDKRWMNGDRLSAREVEILRMYSEGLETEEIARSLSLSKFTIGTYVKRAVAKLHARNRIHAIIMCE
KRGLL
>Mature_244_residues
TLWEAGDHPQYHQDMNQQGEGKVTLGIVDNDQLTLAALSSILRSLPWLHILWTTISGDDAIDNCLSPRTRPQVILVDMSM
ENTSGAMVCRTLRRHSLPIGVVCMTSFSLGSYARAAAEAGAQALISKTDLRILSSAVRRASMGSATQCAADESARFTDVP
DTASNLIPDFTKASDKRWMNGDRLSAREVEILRMYSEGLETEEIARSLSLSKFTIGTYVKRAVAKLHARNRIHAIIMCEK
RGLL

Specific function: Member of the two-component regulatory system yvfT/yvfU [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26981; Mature: 26850

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWEAGDHPQYHQDMNQQGEGKVTLGIVDNDQLTLAALSSILRSLPWLHILWTTISGDD
CCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCH
AIDNCLSPRTRPQVILVDMSMENTSGAMVCRTLRRHSLPIGVVCMTSFSLGSYARAAAEA
HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHH
GAQALISKTDLRILSSAVRRASMGSATQCAADESARFTDVPDTASNLIPDFTKASDKRWM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCC
NGDRLSAREVEILRMYSEGLETEEIARSLSLSKFTIGTYVKRAVAKLHARNRIHAIIMCE
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
KRGLL
CCCCC
>Mature Secondary Structure 
TLWEAGDHPQYHQDMNQQGEGKVTLGIVDNDQLTLAALSSILRSLPWLHILWTTISGDD
CCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCH
AIDNCLSPRTRPQVILVDMSMENTSGAMVCRTLRRHSLPIGVVCMTSFSLGSYARAAAEA
HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHH
GAQALISKTDLRILSSAVRRASMGSATQCAADESARFTDVPDTASNLIPDFTKASDKRWM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCC
NGDRLSAREVEILRMYSEGLETEEIARSLSLSKFTIGTYVKRAVAKLHARNRIHAIIMCE
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
KRGLL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]