| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tauC [C]
Identifier: 213691332
GI number: 213691332
Start: 483517
End: 485301
Strand: Reverse
Name: tauC [C]
Synonym: Blon_0419
Alternate gene names: 213691332
Gene position: 485301-483517 (Counterclockwise)
Preceding gene: 213691339
Following gene: 213691331
Centisome position: 17.13
GC content: 61.96
Gene sequence:
>1785_bases ATGTTTTCATTCAATCGCGTCGACGCGCGTCCAGATGCGTCGGCCCGCAACCCTTCCACCGCCGCGTCCGACCGCCAACC ATTCGCCGTACGCCTGGCCTCCGACGTACTGGTCGCGTCCGGTATTCTGGCGCTGTTCGGTCTGATCGCTTGGATTCTGC CGGCGATCGGCGAACCGATCGGCCCGAAAGGCGTGCCGTCACAAGTCAGTACGAATCTCGCCGACCTGCCGTATTACGCG CTGCGCTCGGTGTTCCGCATGCTCGTGGCACTGTTCTTCTCACTGGTGTTCACGTTCATCTACGGCACGGCGGCCGCGCG CTGCCGCCGCCTGAGCCGCGTGCTGATTCCTCTGTTGGATATTCTGCAGTCGGTACCGATTCTGGGCTTTCTTTCGGCCA CCATCACCATCTGGATGGTGCTGTTCCCCGGCTCGATGCTGGGCGTGGAGGCCGCGTCGATTTTCGCAATCTTCACCAGT CAGGCCTGGAACATGGCGTTCTCGTTCACCCGGTCCCTGACCAGCGAACCAACTGAACTCGACGAGGCGGCCCGCTCACT ACAGCTCACACGCTGGCAACGATTCTGGACACTGGACGTGCCGAACGCGATGATTCCGCTGCTGTGGAACTGCATGATGA GCGTAGGCGGCGGATGGTTCTTCCTGACCGCCTCCGAGATGATCTCGGTGAACAATCGCACCTATGCGTTGCCCGGCATC GGCAGCTTCGTGGCACAGGCGGCGGCCGAGGAGAATCTCGCGGCCATCTGCTGGGCCATCGTGACGATGGTGCTGGTGGT GCTGCTTATCGACGTACTGCTGTGGAAGCCGTTGACCGCGTGGGCGGAGAAGTTCCGCATTACGCAAAGCGAGTCGGCGG TGCGCAAGACCAGTGTGGTGCTGACCATCATTCGTCAGTCACATATCGATGAGATGGTGGCCTGGCTGTTCAGGCCTGTC GGCGACCTGTTCGACACGCTGACCCGCCCGTTGGGTCGGACCGGTGGACGTTGGGCGGCGGACGTGAAGTCCGCACGCAG CCGCGCGCTTGACGTGGTATTCACAGTACTGGTGTTGGCAGCGTGTGCGTTCGGACTGGTGCAGCTTATGCTGGTGATTC ATCGCGATGCGGGATTCGGCGAGCTCGGGCAGGCGTTCGTGTTGGGCATGGTGACGTTCCTGCGCGTGGCGCTGCTTACG CTCGTCTGCTCGGCGATTTGGGTGCCGATTGGCGCGATGATCGGCATGAATCCGCGCGTTTCGCGGTTTATGCAGCCGAT TGTGCAGGTGCTGGCCAGCTTCCCCTCGAACTTCACGTTCCCGTTCGTCACGCTCTGGTTCGTGGCATGCAGCGTGGATA TCAACTGGGGCAGTATTCTGCTGATGGCGTTGGGCACACAGTGGTACATCCTGTTCAATGTGATCGCCGGGGCCAGCCAG ATTCCCGACGATCTGCGTGAGATGACGCGCAGCTTCCAGCTGGGGCGCTGGCAGCGGTGGCGCGATTTGATTTTGCCGGC GGTATTCGGCTCGTGGGTCACGGGCGGCATTACGGCGGCCGGTGGGGCGTGGAATGCCTCGATTGTCTCGGAAATCGTAA GTTATGGACGGCATACGCTGACCGCCTCCGGCTTGGGCGCGTATATCGCCGAGGCCACCGAAAGCGGCAACACCGTGAGG ACCATCATCGGCGTGACCGTGATGAGCGTGTTCGTGGTGGCCGTCAACCGCCTGTTCTGGAACCCGCTGCAGCGCATGGC CGAGCGCCGTTTCGCACTGAACTAA
Upstream 100 bases:
>100_bases ATATTCCGTTATCCGGAAGTCGGGCTCTCGCCTGTAGTGCTCCTTGGATAACCCTTGCATAATTCGTCTTTCCTATGCAT AGGGAGGTCTTTTCATGACC
Downstream 100 bases:
>100_bases AGACTTAAGGAGAATAATATGACTGTTGCAATGGAAACCATTCGTTCGCTGCGGGCGGTGACCCCGCAGAACACCATCAT CGAAGCCCAGCACGTCGGCC
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Anion Transporter; ABC Transporter; ABC-Type Anion Transport System Permease Component; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Anion Transporter Permease Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Nitrate ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; ABC Transporter Inner Membrane Subunit; Sugar ABC Transporter 1 Permease Protein; ABC Transporter Transmembrane Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MFSFNRVDARPDASARNPSTAASDRQPFAVRLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQVSTNLADLPYYA LRSVFRMLVALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEAASIFAIFTS QAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPGI GSFVAQAAAEENLAAICWAIVTMVLVVLLIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAWLFRPV GDLFDTLTRPLGRTGGRWAADVKSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGFGELGQAFVLGMVTFLRVALLT LVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQ IPDDLREMTRSFQLGRWQRWRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTVR TIIGVTVMSVFVVAVNRLFWNPLQRMAERRFALN
Sequences:
>Translated_594_residues MFSFNRVDARPDASARNPSTAASDRQPFAVRLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQVSTNLADLPYYA LRSVFRMLVALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEAASIFAIFTS QAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPGI GSFVAQAAAEENLAAICWAIVTMVLVVLLIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAWLFRPV GDLFDTLTRPLGRTGGRWAADVKSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGFGELGQAFVLGMVTFLRVALLT LVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQ IPDDLREMTRSFQLGRWQRWRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTVR TIIGVTVMSVFVVAVNRLFWNPLQRMAERRFALN >Mature_594_residues MFSFNRVDARPDASARNPSTAASDRQPFAVRLASDVLVASGILALFGLIAWILPAIGEPIGPKGVPSQVSTNLADLPYYA LRSVFRMLVALFFSLVFTFIYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEAASIFAIFTS QAWNMAFSFTRSLTSEPTELDEAARSLQLTRWQRFWTLDVPNAMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPGI GSFVAQAAAEENLAAICWAIVTMVLVVLLIDVLLWKPLTAWAEKFRITQSESAVRKTSVVLTIIRQSHIDEMVAWLFRPV GDLFDTLTRPLGRTGGRWAADVKSARSRALDVVFTVLVLAACAFGLVQLMLVIHRDAGFGELGQAFVLGMVTFLRVALLT LVCSAIWVPIGAMIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQ IPDDLREMTRSFQLGRWQRWRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTLTASGLGAYIAEATESGNTVR TIIGVTVMSVFVVAVNRLFWNPLQRMAERRFALN
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65323; Mature: 65323
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00583 PFKB_KINASES_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFNRVDARPDASARNPSTAASDRQPFAVRLASDVLVASGILALFGLIAWILPAIGEPI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPKGVPSQVSTNLADLPYYALRSVFRMLVALFFSLVFTFIYGTAAARCRRLSRVLIPLLD CCCCCCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQSVPILGFLSATITIWMVLFPGSMLGVEAASIFAIFTSQAWNMAFSFTRSLTSEPTEL HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DEAARSLQLTRWQRFWTLDVPNAMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPGI HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHEECCCEEECCCH GSFVAQAAAEENLAAICWAIVTMVLVVLLIDVLLWKPLTAWAEKFRITQSESAVRKTSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH LTIIRQSHIDEMVAWLFRPVGDLFDTLTRPLGRTGGRWAADVKSARSRALDVVFTVLVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACAFGLVQLMLVIHRDAGFGELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SRFMQPIVQVLASFPSNFTFPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQ HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCC IPDDLREMTRSFQLGRWQRWRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEE TASGLGAYIAEATESGNTVRTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFALN EHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSFNRVDARPDASARNPSTAASDRQPFAVRLASDVLVASGILALFGLIAWILPAIGEPI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPKGVPSQVSTNLADLPYYALRSVFRMLVALFFSLVFTFIYGTAAARCRRLSRVLIPLLD CCCCCCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQSVPILGFLSATITIWMVLFPGSMLGVEAASIFAIFTSQAWNMAFSFTRSLTSEPTEL HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DEAARSLQLTRWQRFWTLDVPNAMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPGI HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHEECCCEEECCCH GSFVAQAAAEENLAAICWAIVTMVLVVLLIDVLLWKPLTAWAEKFRITQSESAVRKTSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH LTIIRQSHIDEMVAWLFRPVGDLFDTLTRPLGRTGGRWAADVKSARSRALDVVFTVLVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACAFGLVQLMLVIHRDAGFGELGQAFVLGMVTFLRVALLTLVCSAIWVPIGAMIGMNPRV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SRFMQPIVQVLASFPSNFTFPFVTLWFVACSVDINWGSILLMALGTQWYILFNVIAGASQ HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCC IPDDLREMTRSFQLGRWQRWRDLILPAVFGSWVTGGITAAGGAWNASIVSEIVSYGRHTL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEE TASGLGAYIAEATESGNTVRTIIGVTVMSVFVVAVNRLFWNPLQRMAERRFALN EHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA