| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is zntR [C]
Identifier: 213691320
GI number: 213691320
Start: 467786
End: 468214
Strand: Direct
Name: zntR [C]
Synonym: Blon_0407
Alternate gene names: 213691320
Gene position: 467786-468214 (Clockwise)
Preceding gene: 213691318
Following gene: 213691322
Centisome position: 16.51
GC content: 55.48
Gene sequence:
>429_bases ATGTCCTACACCATTCGTCAGGTGGCCACGCAGTTCCATATGCAGCCCTCTACGCTGCGCTATTACGAGGATCAGGGATT GCTGACCAACGTGGAGCGCACCGAAACCGGCCAGCGTATATACGAAGACTGCCATATCGACCGTCTGCGCGCGATCTGCT GCTTCAAGAACGCCGGCATGACCATTGACGATCTTAAAAAGTTCTTCGTGTATGAGTCCAATGAGCCCGAGCATATCGAC GAAATCCTTGATCTGCTGGAATCTCGCCGCGAATCCTTGGACGAGCAGCGCCGAGCCCTCAACGAGGCGGCCATGCACGT GCAGCGCAAGCTTCATTACTATGGCGACATCAAGCGTGCCATCGACGCCGGTGGAGACTGGCCGGATTGGCGCGAGTACA AAAACCGCGCCTATTCCATTGAATGTTGA
Upstream 100 bases:
>100_bases GGTATTCGTAAGTGTTCTTAGATACTAAGGTTCCAGTTCAAGTGAACTTGAATGCAAACGGCTGCGACGCTTCGGCGTGT CGCCGCAGTAAGGAGTCATG
Downstream 100 bases:
>100_bases GGCCATCGAATGTTGAGGCCATCGAGTGCTGAGCTGGATGCCGGCTGGGCACAAAGACCGATGCGCGTCGATCGTGGGCG CGTCTATCCGAGTAAGGCCT
Product: transcriptional regulator, MerR family
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator; HTH-Type Transcriptional Regulator; Regulatory Protein MerR; Regulatory Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHID EILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC
Sequences:
>Translated_142_residues MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHID EILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC >Mature_141_residues SYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHIDE ILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16959; Mature: 16828
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGM CCCHHHHHHHHHHCCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TIDDLKKFFVYESNEPEHIDEILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDAGGDWPDWREYKNRAYSIEC HHCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure SYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGM CCHHHHHHHHHHCCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TIDDLKKFFVYESNEPEHIDEILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDAGGDWPDWREYKNRAYSIEC HHCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA