Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is zntR [C]

Identifier: 213691320

GI number: 213691320

Start: 467786

End: 468214

Strand: Direct

Name: zntR [C]

Synonym: Blon_0407

Alternate gene names: 213691320

Gene position: 467786-468214 (Clockwise)

Preceding gene: 213691318

Following gene: 213691322

Centisome position: 16.51

GC content: 55.48

Gene sequence:

>429_bases
ATGTCCTACACCATTCGTCAGGTGGCCACGCAGTTCCATATGCAGCCCTCTACGCTGCGCTATTACGAGGATCAGGGATT
GCTGACCAACGTGGAGCGCACCGAAACCGGCCAGCGTATATACGAAGACTGCCATATCGACCGTCTGCGCGCGATCTGCT
GCTTCAAGAACGCCGGCATGACCATTGACGATCTTAAAAAGTTCTTCGTGTATGAGTCCAATGAGCCCGAGCATATCGAC
GAAATCCTTGATCTGCTGGAATCTCGCCGCGAATCCTTGGACGAGCAGCGCCGAGCCCTCAACGAGGCGGCCATGCACGT
GCAGCGCAAGCTTCATTACTATGGCGACATCAAGCGTGCCATCGACGCCGGTGGAGACTGGCCGGATTGGCGCGAGTACA
AAAACCGCGCCTATTCCATTGAATGTTGA

Upstream 100 bases:

>100_bases
GGTATTCGTAAGTGTTCTTAGATACTAAGGTTCCAGTTCAAGTGAACTTGAATGCAAACGGCTGCGACGCTTCGGCGTGT
CGCCGCAGTAAGGAGTCATG

Downstream 100 bases:

>100_bases
GGCCATCGAATGTTGAGGCCATCGAGTGCTGAGCTGGATGCCGGCTGGGCACAAAGACCGATGCGCGTCGATCGTGGGCG
CGTCTATCCGAGTAAGGCCT

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator; HTH-Type Transcriptional Regulator; Regulatory Protein MerR; Regulatory Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHID
EILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC

Sequences:

>Translated_142_residues
MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHID
EILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC
>Mature_141_residues
SYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGMTIDDLKKFFVYESNEPEHIDE
ILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRAIDAGGDWPDWREYKNRAYSIEC

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16959; Mature: 16828

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGM
CCCHHHHHHHHHHCCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TIDDLKKFFVYESNEPEHIDEILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAGGDWPDWREYKNRAYSIEC
HHCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SYTIRQVATQFHMQPSTLRYYEDQGLLTNVERTETGQRIYEDCHIDRLRAICCFKNAGM
CCHHHHHHHHHHCCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TIDDLKKFFVYESNEPEHIDEILDLLESRRESLDEQRRALNEAAMHVQRKLHYYGDIKRA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAGGDWPDWREYKNRAYSIEC
HHCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA