Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yghZ [H]

Identifier: 213691319

GI number: 213691319

Start: 466602

End: 467612

Strand: Reverse

Name: yghZ [H]

Synonym: Blon_0406

Alternate gene names: 213691319

Gene position: 467612-466602 (Counterclockwise)

Preceding gene: 213691321

Following gene: 213691317

Centisome position: 16.51

GC content: 60.83

Gene sequence:

>1011_bases
ATGTTCGAGCCAACCACCACCTACGCTCCCAACCCGCACCGTTACGACACGATGACCTACAACCGTGCCGGCACCTCCGG
CCTCAAGTTGCCGGCCGTCTCACTCGGCTTCTGGCACAACTTCGGCGACATCACGCCATTCGACCAGATGAAGTCCCTGG
TCTTCACCGCCTTCGACAACGGCATCACCCACTTCGATCTGGCCAACAACTACGGCCCCGAGCCCGGCCAGGCCGAGAAG
AACTGCGGCCTGCTGCTCGCCAAGTACTTCAAGCACCACCGCGACGAACTCGTCATCTCCACCAAGGCCGGCTATGAAAT
GTGGGCAGGCCCGTATGGCGACCTCGGCAGCCGCAAGTACCTGCTCGCCAGCCTCGACCAGTCGCTCGAACGCTTGGGCT
TGGATTATGTGGACATCTTCTACCATCACCACCCGGACCCGGAAACCCCGCTGGAGGAGACCATGGGCGCACTGGCTCAG
GCCGTGAACTCCGGCAAGGCCCTGTACGTGGGTCTGTCCAACTACGATGGTCCGACGATGGAGAAGGCCGCCGCGATCCT
CACCGACCTGCACGTGCCGTTCATCATCAACCAGAACAAGTACAACATCCTCGACCGCACCGTGGAAAAGAACGGTCTGA
AGGAGACGGCTTACAAGCTGGGCAAGGGCCTTATCACCTTCTGCCCGCTGGCTCAGGGCCTGCTGACCAACCGTTATCTG
AACGGCATTCCGGCCGACAGCCGCATGGCTCACGATCCGCGATTCCTCAACGATTCCGCTCTGACCGAGAAACTGCACAA
GCAGGTCGTGGACCTGAACAATCTGGCCGCCGAACGCGGCCAGACGCTGGCCGAGATGAGCCTGGCATGGCTGCTGCACG
ATGGTAAGGTGATCTCCGTGCTGACCGGAGCCTCCAAGCCGCAGCAGATTCTCGACAACATCGACGCCCTCAAGAACACC
CACTTCACCGTCGAAGAGCTCAAGCTGATCGACGAGATTTCGGCTCGGTGA

Upstream 100 bases:

>100_bases
TAGTATCTAAGAACACTTACGAATACCACTCGATCGGCGTCGGTTTGCCCATCGCAGACCAGCATTCGTAAGAACAAAAA
TGACATTGTAAGGAGACTCA

Downstream 100 bases:

>100_bases
CCATTTCGGCTCCCTTCGCTGAGGGGAGCCAAGTACCACCTTTAGCGCGTCATCTCTTCGTAGATGCGCTTGCAATCGGG
GCAAACCGGGTACTTGGACG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MFEPTTTYAPNPHRYDTMTYNRAGTSGLKLPAVSLGFWHNFGDITPFDQMKSLVFTAFDNGITHFDLANNYGPEPGQAEK
NCGLLLAKYFKHHRDELVISTKAGYEMWAGPYGDLGSRKYLLASLDQSLERLGLDYVDIFYHHHPDPETPLEETMGALAQ
AVNSGKALYVGLSNYDGPTMEKAAAILTDLHVPFIINQNKYNILDRTVEKNGLKETAYKLGKGLITFCPLAQGLLTNRYL
NGIPADSRMAHDPRFLNDSALTEKLHKQVVDLNNLAAERGQTLAEMSLAWLLHDGKVISVLTGASKPQQILDNIDALKNT
HFTVEELKLIDEISAR

Sequences:

>Translated_336_residues
MFEPTTTYAPNPHRYDTMTYNRAGTSGLKLPAVSLGFWHNFGDITPFDQMKSLVFTAFDNGITHFDLANNYGPEPGQAEK
NCGLLLAKYFKHHRDELVISTKAGYEMWAGPYGDLGSRKYLLASLDQSLERLGLDYVDIFYHHHPDPETPLEETMGALAQ
AVNSGKALYVGLSNYDGPTMEKAAAILTDLHVPFIINQNKYNILDRTVEKNGLKETAYKLGKGLITFCPLAQGLLTNRYL
NGIPADSRMAHDPRFLNDSALTEKLHKQVVDLNNLAAERGQTLAEMSLAWLLHDGKVISVLTGASKPQQILDNIDALKNT
HFTVEELKLIDEISAR
>Mature_336_residues
MFEPTTTYAPNPHRYDTMTYNRAGTSGLKLPAVSLGFWHNFGDITPFDQMKSLVFTAFDNGITHFDLANNYGPEPGQAEK
NCGLLLAKYFKHHRDELVISTKAGYEMWAGPYGDLGSRKYLLASLDQSLERLGLDYVDIFYHHHPDPETPLEETMGALAQ
AVNSGKALYVGLSNYDGPTMEKAAAILTDLHVPFIINQNKYNILDRTVEKNGLKETAYKLGKGLITFCPLAQGLLTNRYL
NGIPADSRMAHDPRFLNDSALTEKLHKQVVDLNNLAAERGQTLAEMSLAWLLHDGKVISVLTGASKPQQILDNIDALKNT
HFTVEELKLIDEISAR

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27436969, Length=308, Percent_Identity=36.3636363636364, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI4504825, Length=306, Percent_Identity=36.2745098039216, Blast_Score=174, Evalue=8e-44,
Organism=Homo sapiens, GI27436962, Length=321, Percent_Identity=32.7102803738318, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI27436964, Length=327, Percent_Identity=31.8042813455657, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI27436966, Length=321, Percent_Identity=32.398753894081, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI27436971, Length=322, Percent_Identity=31.9875776397516, Blast_Score=156, Evalue=3e-38,
Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=54.4072948328268, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI87081735, Length=314, Percent_Identity=30.8917197452229, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789199, Length=357, Percent_Identity=30.5322128851541, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=28.1818181818182, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786400, Length=162, Percent_Identity=34.5679012345679, Blast_Score=65, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325169, Length=339, Percent_Identity=28.023598820059, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=25.9938837920489, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319958, Length=302, Percent_Identity=26.4900662251656, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322615, Length=252, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6319951, Length=295, Percent_Identity=26.4406779661017, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640980, Length=325, Percent_Identity=25.8461538461538, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI45549126, Length=325, Percent_Identity=25.8461538461538, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24646155, Length=326, Percent_Identity=27.9141104294479, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24646159, Length=238, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 37413; Mature: 37413

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPTTTYAPNPHRYDTMTYNRAGTSGLKLPAVSLGFWHNFGDITPFDQMKSLVFTAFDN
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEHHCCCCCCCCCHHHHHHHHHHHHCC
GITHFDLANNYGPEPGQAEKNCGLLLAKYFKHHRDELVISTKAGYEMWAGPYGDLGSRKY
CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCCCCHH
LLASLDQSLERLGLDYVDIFYHHHPDPETPLEETMGALAQAVNSGKALYVGLSNYDGPTM
HHHHHHHHHHHHCCCCEEEHEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
EKAAAILTDLHVPFIINQNKYNILDRTVEKNGLKETAYKLGKGLITFCPLAQGLLTNRYL
HHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NGIPADSRMAHDPRFLNDSALTEKLHKQVVDLNNLAAERGQTLAEMSLAWLLHDGKVISV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEE
LTGASKPQQILDNIDALKNTHFTVEELKLIDEISAR
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEPTTTYAPNPHRYDTMTYNRAGTSGLKLPAVSLGFWHNFGDITPFDQMKSLVFTAFDN
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEHHCCCCCCCCCHHHHHHHHHHHHCC
GITHFDLANNYGPEPGQAEKNCGLLLAKYFKHHRDELVISTKAGYEMWAGPYGDLGSRKY
CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCCCCHH
LLASLDQSLERLGLDYVDIFYHHHPDPETPLEETMGALAQAVNSGKALYVGLSNYDGPTM
HHHHHHHHHHHHCCCCEEEHEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
EKAAAILTDLHVPFIINQNKYNILDRTVEKNGLKETAYKLGKGLITFCPLAQGLLTNRYL
HHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NGIPADSRMAHDPRFLNDSALTEKLHKQVVDLNNLAAERGQTLAEMSLAWLLHDGKVISV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEE
LTGASKPQQILDNIDALKNTHFTVEELKLIDEISAR
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]