| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691263
Identifier: 213691263
GI number: 213691263
Start: 403114
End: 404292
Strand: Direct
Name: 213691263
Synonym: Blon_0347
Alternate gene names: NA
Gene position: 403114-404292 (Clockwise)
Preceding gene: 213691262
Following gene: 213691264
Centisome position: 14.23
GC content: 60.39
Gene sequence:
>1179_bases ATGATGTCGGCCGTATTCGACGAATACGGCTCGTACACGTCCTCATGGTCGGCGGTCTGCGCGAAATCCATCGCCGAAGA CGAGGACTGGTGGAACGAACTTTCGTCCGCCTATCAGTGGGTGATGTCTGAAATGGGGCACAAGGGAATGCCGCGTCCGG ACCCGGATGCGGCCCCGTTGTGGGCGTGGGTGCGCTGGGTCGATTCGAAAAGCCGGGCGCGCACCCGTCCCGACCGCCGG TATCCGGGTTTCCGCAACCAGTACGACGGGTTGGAGCTCCTGCATCTGCAGGTCGATGAGAATCGTGTATTGTGCACGGA TTTCGACCAGTACCATTGTGTGATCAACCGGTGGCCGTGCGCCCCGTTGGATGCCGACAGGTGGCCTCCCGCCGAATGCG ACCGGTGGCTGGACGAGCATTGGGACGACCCGGCCGACATGAAAGCGGTCCAGTATCGGAAGAACACGATCGTGGATCCG AAACGTCTGCCGGACCGGTGGATACAGGCCTGCCTGTGGACGGTCACGCCCGAAGATGTGTTTGATGTGCGCCGTGCGTG CGGGAAACCGGATACCATTGGGAATCTGGATGATCTGAGGAGCAGGGCGGCCAGGTTTGCCGAATCATGGGCTGGACGCG GCGACGAGAAATCCGAGACCCAACAGTATTGGCGGGACCTGTTGGACAAGGTGCTGCTCATTCCGGACACGAGCGACGGG CAGACGCTCTGGTTCGAACGTCGCACCGCATTGGGCGGTTTCATCGACGCGCTCATGATTCAGGCCCGCGTGCTCGTGGA GCAGAAGAGCCTCGGCGTGGATTTGGACAAGCCGGAGCCGCGCCGGGGGAGCATGGTCACGCCCGTCCGACAGGCGAAAC GGTATGCGGACGCCCTGATCGCTGATCCCGGTTTTTCAGGACGCATGCCTTCTCCTGGAAAGGAGCGGAGAGCAATGGAT TACAGCGAATTCGACGCCCTGCCATTGGAGACCGATATGGTTTCCATCAGCAAGGACCCGTCGCACGACGGCATTCGCGA CATGTCCTCATTGGAAAAGGCTGGTGAAATCGTCTCCGCACGAATCGGGAGATTGGGCGGACTCCGTTGGGAATCGCGGA TAGGAGCGGGGTGTCAACTGGTAACTAGGGTGTGTTTACACTATCTAGGTTTTGTGTGA
Upstream 100 bases:
>100_bases CGGAGTTTTCGTTGTTTCAGGACTGGATTCCGTGTGCCCCGTCTTGTCGGCGCGTGGCATCAGGCATTGGTCAGAGCGCT GACTCGCTGGGGTGACTCCA
Downstream 100 bases:
>100_bases TGATTGGCGTATGTGTACGCCGGGGTATGGCATCACGCTTGACCGGTTCATGAGGGTCGCGCACCTGTTGCCGCGCCAGA GGGGCAACGTGGCGGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MMSAVFDEYGSYTSSWSAVCAKSIAEDEDWWNELSSAYQWVMSEMGHKGMPRPDPDAAPLWAWVRWVDSKSRARTRPDRR YPGFRNQYDGLELLHLQVDENRVLCTDFDQYHCVINRWPCAPLDADRWPPAECDRWLDEHWDDPADMKAVQYRKNTIVDP KRLPDRWIQACLWTVTPEDVFDVRRACGKPDTIGNLDDLRSRAARFAESWAGRGDEKSETQQYWRDLLDKVLLIPDTSDG QTLWFERRTALGGFIDALMIQARVLVEQKSLGVDLDKPEPRRGSMVTPVRQAKRYADALIADPGFSGRMPSPGKERRAMD YSEFDALPLETDMVSISKDPSHDGIRDMSSLEKAGEIVSARIGRLGGLRWESRIGAGCQLVTRVCLHYLGFV
Sequences:
>Translated_392_residues MMSAVFDEYGSYTSSWSAVCAKSIAEDEDWWNELSSAYQWVMSEMGHKGMPRPDPDAAPLWAWVRWVDSKSRARTRPDRR YPGFRNQYDGLELLHLQVDENRVLCTDFDQYHCVINRWPCAPLDADRWPPAECDRWLDEHWDDPADMKAVQYRKNTIVDP KRLPDRWIQACLWTVTPEDVFDVRRACGKPDTIGNLDDLRSRAARFAESWAGRGDEKSETQQYWRDLLDKVLLIPDTSDG QTLWFERRTALGGFIDALMIQARVLVEQKSLGVDLDKPEPRRGSMVTPVRQAKRYADALIADPGFSGRMPSPGKERRAMD YSEFDALPLETDMVSISKDPSHDGIRDMSSLEKAGEIVSARIGRLGGLRWESRIGAGCQLVTRVCLHYLGFV >Mature_392_residues MMSAVFDEYGSYTSSWSAVCAKSIAEDEDWWNELSSAYQWVMSEMGHKGMPRPDPDAAPLWAWVRWVDSKSRARTRPDRR YPGFRNQYDGLELLHLQVDENRVLCTDFDQYHCVINRWPCAPLDADRWPPAECDRWLDEHWDDPADMKAVQYRKNTIVDP KRLPDRWIQACLWTVTPEDVFDVRRACGKPDTIGNLDDLRSRAARFAESWAGRGDEKSETQQYWRDLLDKVLLIPDTSDG QTLWFERRTALGGFIDALMIQARVLVEQKSLGVDLDKPEPRRGSMVTPVRQAKRYADALIADPGFSGRMPSPGKERRAMD YSEFDALPLETDMVSISKDPSHDGIRDMSSLEKAGEIVSARIGRLGGLRWESRIGAGCQLVTRVCLHYLGFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44926; Mature: 44926
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAVFDEYGSYTSSWSAVCAKSIAEDEDWWNELSSAYQWVMSEMGHKGMPRPDPDAAPL CCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH WAWVRWVDSKSRARTRPDRRYPGFRNQYDGLELLHLQVDENRVLCTDFDQYHCVINRWPC HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHEECCCC APLDADRWPPAECDRWLDEHWDDPADMKAVQYRKNTIVDPKRLPDRWIQACLWTVTPEDV CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHHHHCCCHHHH FDVRRACGKPDTIGNLDDLRSRAARFAESWAGRGDEKSETQQYWRDLLDKVLLIPDTSDG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCC QTLWFERRTALGGFIDALMIQARVLVEQKSLGVDLDKPEPRRGSMVTPVRQAKRYADALI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ADPGFSGRMPSPGKERRAMDYSEFDALPLETDMVSISKDPSHDGIRDMSSLEKAGEIVSA CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH RIGRLGGLRWESRIGAGCQLVTRVCLHYLGFV HHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSAVFDEYGSYTSSWSAVCAKSIAEDEDWWNELSSAYQWVMSEMGHKGMPRPDPDAAPL CCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH WAWVRWVDSKSRARTRPDRRYPGFRNQYDGLELLHLQVDENRVLCTDFDQYHCVINRWPC HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHEECCCC APLDADRWPPAECDRWLDEHWDDPADMKAVQYRKNTIVDPKRLPDRWIQACLWTVTPEDV CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHHHHCCCHHHH FDVRRACGKPDTIGNLDDLRSRAARFAESWAGRGDEKSETQQYWRDLLDKVLLIPDTSDG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCC QTLWFERRTALGGFIDALMIQARVLVEQKSLGVDLDKPEPRRGSMVTPVRQAKRYADALI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ADPGFSGRMPSPGKERRAMDYSEFDALPLETDMVSISKDPSHDGIRDMSSLEKAGEIVSA CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH RIGRLGGLRWESRIGAGCQLVTRVCLHYLGFV HHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA