| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691238
Identifier: 213691238
GI number: 213691238
Start: 372368
End: 373534
Strand: Direct
Name: 213691238
Synonym: Blon_0321
Alternate gene names: NA
Gene position: 372368-373534 (Clockwise)
Preceding gene: 213691237
Following gene: 213691239
Centisome position: 13.15
GC content: 60.67
Gene sequence:
>1167_bases ATGAACAACCTGTGTAAGATCGCGGCCGGCTCCCTTGCCGCCGTACTCGCGTTCTCGATGGCCGCCTGCGGTTCGAGCAA CGCCTCCTCCGATGGCACCGGCGAAAGCACCGGCAAGGCCGTCACCGTGAATGAAAAGTCCGCCAAAGCCATCTCCCTCG CCGACTTCGGCACCATGGAAGACCTCGAGAAGGCCGCCAAGGAAGAAGGCGCGCTGAACGTCATCGCCTTGCCGCATGAT TGGTCCAACTACGGCGAGGTCATCGAGGGCTTCAAGAAGAAGTACCCGGAGATCAAGATCACCGAGCTCGATCCGAACAC TTCTTCCAAGGAAGAGCTCAATGTAGCCAAGACCAACAAGGGCACCGACGCCGCCCCCGATGTCTTCGACGTCGGCCAGG CCATCGCCGCCACCTCCACCGACTATTTCGCCCCGTACAAGGTGCAGGCCTGGGACAAGATTCCGGACGAGCAGAAGGAC GCCAATGGTGCCTACTACGCCGACTACACCGGTATCATGTCCGTGGGTTGGAACGCCGACAAGTACGGCGATGTCACCTC CCTGAACGACCTGCTCGATCCGAAGTTCGCCGGCACCGTGGCCATGAACGGCAAGCCCACCGAGGCCGGCGCGGCCTTCA ACGGCTATCTGATGGTCAACCAGCTCGCCGGCGGCGACATCAACAACCTGCAGCCCGGTCTCGACTTCTTCAAGAAGCTC AAGGAAGCCGGCAACCTGACCACCATCGATGTGACCAACGGCACCATCGACTCCGGCCAGGTCGGTGTGGTCTTCGACTG GACCTACAACCAGGCCTCCTACAAGAAGGAACTCAAGTCCAAGGGCGTGAACTGGAAGTACAAGACCTTCCCCAAAGCTC AGGTTGTCAGCTACTACAACCAGGCCATCAACAAGGACGCGCCGCACCCCGCCGCCGCACGCCTGTGGGAGGAATACCTG TACACCGCCGAAACCCAGAACCTGTGGTTCAAGGGCGGCGCCAACCCGGTGCTGCTCGACTCCATGAAGGCGGACGGCAC CGTCGACCAGGTCACCCTGAAAGACGCCATCACCATCGAAGGCCAGCCGGTCACCTACAGCAACGATGACTCCACCCGCA TCACCGAGTGGCTTCAAAACAACTGGGACAAGACGATCGGCAACTGA
Upstream 100 bases:
>100_bases CTTAGTTTCTTCTCTTGGATTTGCAGGCCGTGCGGATGCCGCGCATCACGGGCCTGATTCCCCAGACCATCGTCTGGATG ATGTTGAGAAAAGGAACAGT
Downstream 100 bases:
>100_bases GAGTCCACGATGACCGCCGCAATCGCACCCATCGCACCGAACGGACCCGTCGCCTCCAAGGCCGCGGGTCCGTCCGCCGC ATCGTCCCCCGCTTCGTCCG
Product: extracellular solute-binding protein, family 1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNNLCKIAAGSLAAVLAFSMAACGSSNASSDGTGESTGKAVTVNEKSAKAISLADFGTMEDLEKAAKEEGALNVIALPHD WSNYGEVIEGFKKKYPEIKITELDPNTSSKEELNVAKTNKGTDAAPDVFDVGQAIAATSTDYFAPYKVQAWDKIPDEQKD ANGAYYADYTGIMSVGWNADKYGDVTSLNDLLDPKFAGTVAMNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL KEAGNLTTIDVTNGTIDSGQVGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYNQAINKDAPHPAAARLWEEYL YTAETQNLWFKGGANPVLLDSMKADGTVDQVTLKDAITIEGQPVTYSNDDSTRITEWLQNNWDKTIGN
Sequences:
>Translated_388_residues MNNLCKIAAGSLAAVLAFSMAACGSSNASSDGTGESTGKAVTVNEKSAKAISLADFGTMEDLEKAAKEEGALNVIALPHD WSNYGEVIEGFKKKYPEIKITELDPNTSSKEELNVAKTNKGTDAAPDVFDVGQAIAATSTDYFAPYKVQAWDKIPDEQKD ANGAYYADYTGIMSVGWNADKYGDVTSLNDLLDPKFAGTVAMNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL KEAGNLTTIDVTNGTIDSGQVGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYNQAINKDAPHPAAARLWEEYL YTAETQNLWFKGGANPVLLDSMKADGTVDQVTLKDAITIEGQPVTYSNDDSTRITEWLQNNWDKTIGN >Mature_388_residues MNNLCKIAAGSLAAVLAFSMAACGSSNASSDGTGESTGKAVTVNEKSAKAISLADFGTMEDLEKAAKEEGALNVIALPHD WSNYGEVIEGFKKKYPEIKITELDPNTSSKEELNVAKTNKGTDAAPDVFDVGQAIAATSTDYFAPYKVQAWDKIPDEQKD ANGAYYADYTGIMSVGWNADKYGDVTSLNDLLDPKFAGTVAMNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL KEAGNLTTIDVTNGTIDSGQVGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYNQAINKDAPHPAAARLWEEYL YTAETQNLWFKGGANPVLLDSMKADGTVDQVTLKDAITIEGQPVTYSNDDSTRITEWLQNNWDKTIGN
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41990; Mature: 41990
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLCKIAAGSLAAVLAFSMAACGSSNASSDGTGESTGKAVTVNEKSAKAISLADFGTME CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHH DLEKAAKEEGALNVIALPHDWSNYGEVIEGFKKKYPEIKITELDPNTSSKEELNVAKTNK HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCEEECCC GTDAAPDVFDVGQAIAATSTDYFAPYKVQAWDKIPDEQKDANGAYYADYTGIMSVGWNAD CCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEECCEEEEECCCCC KYGDVTSLNDLLDPKFAGTVAMNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL CCCCCCHHHHHCCCCCCCEEEECCCCCCCCCEEECEEEEEECCCCCCCCCCHHHHHHHHH KEAGNLTTIDVTNGTIDSGQVGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYN HHCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHH QAINKDAPHPAAARLWEEYLYTAETQNLWFKGGANPVLLDSMKADGTVDQVTLKDAITIE HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEC GQPVTYSNDDSTRITEWLQNNWDKTIGN CCCEEECCCCCHHHHHHHHCCCHHCCCC >Mature Secondary Structure MNNLCKIAAGSLAAVLAFSMAACGSSNASSDGTGESTGKAVTVNEKSAKAISLADFGTME CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHH DLEKAAKEEGALNVIALPHDWSNYGEVIEGFKKKYPEIKITELDPNTSSKEELNVAKTNK HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCEEECCC GTDAAPDVFDVGQAIAATSTDYFAPYKVQAWDKIPDEQKDANGAYYADYTGIMSVGWNAD CCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEECCEEEEECCCCC KYGDVTSLNDLLDPKFAGTVAMNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL CCCCCCHHHHHCCCCCCCEEEECCCCCCCCCEEECEEEEEECCCCCCCCCCHHHHHHHHH KEAGNLTTIDVTNGTIDSGQVGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYN HHCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHH QAINKDAPHPAAARLWEEYLYTAETQNLWFKGGANPVLLDSMKADGTVDQVTLKDAITIE HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEC GQPVTYSNDDSTRITEWLQNNWDKTIGN CCCEEECCCCCHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA