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The map label for this gene is atpD [H]

Identifier: 213691226

GI number: 213691226

Start: 359832

End: 361304

Strand: Direct

Name: atpD [H]

Synonym: Blon_0309

Alternate gene names: 213691226

Gene position: 359832-361304 (Clockwise)

Preceding gene: 213691225

Following gene: 213691227

Centisome position: 12.7

GC content: 62.59

Gene sequence:

>1473_bases
ATGGCTGACAACCAGACCACTGCGGCCGAGCCTACCAACGGTCGCGTCACCCGCGTCCAGGGCTCGGTTATCGACGTTGA
ATTCCCGGTGGGTCATCTGCCCGACATCTACAACGCCCTGAAAGTAACGATCGTCAACACCGGCGCCAAGGAAGAAGGCG
AGGCGAAGGAGACCGAGATCACCCTCGAGGTCGAACAGCACCTCGGTGATTCCACAGTCCGTTGCGTCGCTCTGAAGCCC
ACCGACGGCCTGGTCCGTGGTGCCTCCGTCTCCGACACCGGCGTCCCGATCTCCGTGCCTGTCGGCGACGTGACCAAGGG
CCACGTCTTCGATGTGTCCGGTAACATCCTCAACAAGAAGCCGGATGAGACCATCACCGTCTCCGAGCGTTGGCCAATCC
ACCGCAACCCGCCGGCCTTCGATCAGCTGGAGTCCAAGACCCAGATGTTCGAGACGGGCATCAAGGTCATCGACCTGCTG
ACCCCGTACGTGCAGGGCGGCAAGATCGGTCTGTTCGGTGGTGCAGGTGTGGGCAAGACCGTGCTGATTCAGGAAATGAT
TCAGCGCGTGGCCCAGAACCACGGTGGTGTGTCCGTGTTCGCTGGCGTCGGCGAGCGTACCCGTGAGGGTAACGATCTGA
TCGGCGAAATGGCCGAGGCCGGCGTGCTTGAGAAGACCGCACTGGTCTTTGGCCAGATGGATGAGCAGCCGGGCACCCGT
CTGCGCGTCCCGCTGACCGCACTGACCATGGCAGAGTACTTCCGTGACGTGCAGAACCAGGACGTGCTGCTGTTCATCGA
CAACATCTTCCGCTTCACCCAGGCCGGTTCCGAGGTGTCCACCCTGCTGGGTCGTATGCCTTCCGCCGTGGGTTACCAGC
CGAACCTGGCCGATGAGATGGGTTCCCTTCAGGAGCGCATCACCTCGACCCGTGGTCACTCGATCACCTCGTTGCAGGCC
ATTTACGTGCCGGCCGATGATTACACCGACCCGGCCCCGGCCACGACCTTCGCCCACCTGGATGCGACCACCGAGCTTTC
CCGTGACATCGCCTCCAAGGGCATCTACCCGGCCGTGGATCCGCTGAGCTCCACTTCGCGAATCCTCGATCCGCGTTACG
TGGGCCAGGCCCACTACGACTGCGCCAACCGCGTCAAGGCGATTCTGCAGCGCAACAAGGAACTGCAGGACATCATCGCC
CTGATCGGTATCGACGAGCTCAGCGAGGAAGACAAGACCACCGTGAACCGTGCCCGCAAGATCGAGCAGTTCCTCGGCCA
GAACTTCTACGTGGCCGAGAAGTTCACCGGTCGCCCCGGCTCCTACGTGCCGGCCGACGAGACCATCGAAGCCTTCACCC
GCATCTGCGACGGCGTGTACGACGACGTCCCGGAGCAGGCGTTCTCCGGCATCGGCGGCATCGACGACCTCGAAGAGAAG
TGGCACAACATGCAGAAGGAACTGGGTGCGTGA

Upstream 100 bases:

>100_bases
GCAAGCTCAACGCTTCCCGTCAGGCCTCGATCACCCAGGAACTTACCGAAATCATCGGCAGCGCCGACGCGCTGACCAAG
AAGGAAGAGTAGGAACGCAT

Downstream 100 bases:

>100_bases
TGGCTGCGGAAAAAACCACGATGAAGGTCAACATCGTCGCCGCTGACCACCCTGTGTGGCACGGCGAGGCGACGAGTGTG
ACCATTCCCGCCTCTGAGGG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEITLEVEQHLGDSTVRCVALKP
TDGLVRGASVSDTGVPISVPVGDVTKGHVFDVSGNILNKKPDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLL
TPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTR
LRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGHSITSLQA
IYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIA
LIGIDELSEEDKTTVNRARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEK
WHNMQKELGA

Sequences:

>Translated_490_residues
MADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEITLEVEQHLGDSTVRCVALKP
TDGLVRGASVSDTGVPISVPVGDVTKGHVFDVSGNILNKKPDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLL
TPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTR
LRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGHSITSLQA
IYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIA
LIGIDELSEEDKTTVNRARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEK
WHNMQKELGA
>Mature_489_residues
ADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEITLEVEQHLGDSTVRCVALKPT
DGLVRGASVSDTGVPISVPVGDVTKGHVFDVSGNILNKKPDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLLT
PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRL
RVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGHSITSLQAI
YVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIAL
IGIDELSEEDKTTVNRARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEKW
HNMQKELGA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=481, Percent_Identity=60.0831600831601, Blast_Score=554, Evalue=1e-158,
Organism=Homo sapiens, GI19913424, Length=332, Percent_Identity=29.2168674698795, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI19913426, Length=364, Percent_Identity=23.6263736263736, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI19913428, Length=369, Percent_Identity=23.8482384823848, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI50345984, Length=299, Percent_Identity=26.0869565217391, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4757810, Length=299, Percent_Identity=26.0869565217391, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI1790170, Length=472, Percent_Identity=58.0508474576271, Blast_Score=541, Evalue=1e-155,
Organism=Escherichia coli, GI1788251, Length=400, Percent_Identity=28.75, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1790172, Length=319, Percent_Identity=26.3322884012539, Blast_Score=85, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI25144756, Length=491, Percent_Identity=59.0631364562118, Blast_Score=547, Evalue=1e-156,
Organism=Caenorhabditis elegans, GI17565854, Length=324, Percent_Identity=29.320987654321, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17510931, Length=359, Percent_Identity=25.0696378830084, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17570191, Length=424, Percent_Identity=23.3490566037736, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71988080, Length=363, Percent_Identity=25.6198347107438, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71988063, Length=362, Percent_Identity=25.6906077348066, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71988074, Length=342, Percent_Identity=24.2690058479532, Blast_Score=72, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322581, Length=472, Percent_Identity=59.5338983050847, Blast_Score=553, Evalue=1e-158,
Organism=Saccharomyces cerevisiae, GI6319603, Length=365, Percent_Identity=26.3013698630137, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6320016, Length=257, Percent_Identity=27.6264591439689, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6319370, Length=370, Percent_Identity=26.2162162162162, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24638766, Length=481, Percent_Identity=59.4594594594595, Blast_Score=546, Evalue=1e-156,
Organism=Drosophila melanogaster, GI28574560, Length=475, Percent_Identity=57.6842105263158, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI20129479, Length=327, Percent_Identity=29.0519877675841, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24583992, Length=329, Percent_Identity=28.8753799392097, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24583988, Length=327, Percent_Identity=29.0519877675841, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24583986, Length=327, Percent_Identity=29.0519877675841, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24583984, Length=327, Percent_Identity=29.0519877675841, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI281361666, Length=358, Percent_Identity=24.8603351955307, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24646341, Length=358, Percent_Identity=24.8603351955307, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17136796, Length=358, Percent_Identity=24.8603351955307, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24658560, Length=362, Percent_Identity=25.414364640884, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24638768, Length=102, Percent_Identity=44.1176470588235, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 53339; Mature: 53207

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEI
CCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCHHHHCEEEEEEECCCCCCCCCCCEEE
TLEVEQHLGDSTVRCVALKPTDGLVRGASVSDTGVPISVPVGDVTKGHVFDVSGNILNKK
EEEEHHHCCCCCEEEEEECCCCCCEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCC
PDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKT
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
VLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCE
LRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEM
EECHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCHHHHH
GSLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVD
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCC
PLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELSEEDKTTVNRARK
CCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHCCHHHHHHHHHHH
IEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEK
HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
WHNMQKELGA
HHHHHHHHCC
>Mature Secondary Structure 
ADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEI
CCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCHHHHCEEEEEEECCCCCCCCCCCEEE
TLEVEQHLGDSTVRCVALKPTDGLVRGASVSDTGVPISVPVGDVTKGHVFDVSGNILNKK
EEEEHHHCCCCCEEEEEECCCCCCEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCC
PDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKT
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
VLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCE
LRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEM
EECHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCHHHHH
GSLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVD
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCC
PLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELSEEDKTTVNRARK
CCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHCCHHHHHHHHHHH
IEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEK
HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
WHNMQKELGA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA