| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is metA [H]
Identifier: 213691219
GI number: 213691219
Start: 353280
End: 354314
Strand: Direct
Name: metA [H]
Synonym: Blon_0302
Alternate gene names: 213691219
Gene position: 353280-354314 (Clockwise)
Preceding gene: 213691216
Following gene: 213691220
Centisome position: 12.47
GC content: 58.26
Gene sequence:
>1035_bases ATGCCTATCAAGATCCCCAGTGGCCTGCCGGCCAGAGATATCCTCGATTCGGAGCGCATCTTCGCTCTGGAGAAGCCCGA GGCGGAGCGTCAGCGCGTCCGTCCTCTCAAACTGGTGATCCTGAACTTGATGCCCAAGAAGATCGAAACCGAAACGCAGC TGCTGAGACTGATCTCCAAATCGCCGCTGCAGGTCGAGATCGACTTCATGAAGACCTCCACACATGAGGCCACGCACGTT TCCGCCGATCATCTCGTCAAGTTCTACGAAAACCTCGATGCGCTCAAAGACAACTATTACGACGGTTTTGTGGTCACCGG CGCGCCTGTAGAGCATATGCCGTTCGAAGATGTGGACTACTGGGACGAGTTCAAGACGATTCTCGACTGGGCCTCCACCC ATGTGTTCTCCACCATGTACCTGTGCTGGGGCGCGATGGGCGCACTGTACTACCGCTACGGCATCCACAAGGTGGATTAC CCCGAGAAGATTTTCGGCGTATTCCCGCAGTACCTGCAGGACGAATACTGCTTCCTGACCAATGGTTTCGACGAGATTGA TCTGCAGCCGCACTCCCGCCTCGCCGGCGTGAACGAAAACGAGGTACGTGCCAACCATGACCTTCAGATCTTGACTTGGG GGCCACAGTCCGGCCCGGGCCTGATCGCCACACGTGACTTCTCCGAAGTGTTCGCGCTCGGCCATTGGGAGTACGGCAAG TACACGCTCGCCGAGGAATACGAGCGCGATATGGCCAAGGGCATGACCAACGTGCCCTTCCCGAAGAACTACTTCCCGCA TGACGATTCGAAACTGGAACCGTTGTTCGCCTGGCGCGCCCACGCCAATCTGCTGTGGCGCAACTGGCTCAACTGGGTGT ACCAGACCACGCCGTATGACCTGACCGAGGTGCCGCAGCTCAGGGCTGAGAAGAAGCTCGGTACTGATCGTTCGATTCGG CATGAGCCGGGCGGGCCGCGCCAGGATGATTTCGAGCCGTTCGCCCACGACGGATACGGAGTGATCAGAGGGTAG
Upstream 100 bases:
>100_bases GCTACCGAGCTGCTCCACCCCGTGTCGCGCCGGTGTCCCGTGAACCGCCCGCCGGACGGATGCCTTGAACCGTTATCCCG AACGTTGACATAATGGGAGC
Downstream 100 bases:
>100_bases CGCAAATGCCGCACATCCTCGTATTGTGACTAATAGCGCACAATGCTTGCGCAACATCCGAAAAACCTTGCGCCGCCGCC GATTCCAGAAGACGCGCCGG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISKSPLQVEIDFMKTSTHEATHV SADHLVKFYENLDALKDNYYDGFVVTGAPVEHMPFEDVDYWDEFKTILDWASTHVFSTMYLCWGAMGALYYRYGIHKVDY PEKIFGVFPQYLQDEYCFLTNGFDEIDLQPHSRLAGVNENEVRANHDLQILTWGPQSGPGLIATRDFSEVFALGHWEYGK YTLAEEYERDMAKGMTNVPFPKNYFPHDDSKLEPLFAWRAHANLLWRNWLNWVYQTTPYDLTEVPQLRAEKKLGTDRSIR HEPGGPRQDDFEPFAHDGYGVIRG
Sequences:
>Translated_344_residues MPIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISKSPLQVEIDFMKTSTHEATHV SADHLVKFYENLDALKDNYYDGFVVTGAPVEHMPFEDVDYWDEFKTILDWASTHVFSTMYLCWGAMGALYYRYGIHKVDY PEKIFGVFPQYLQDEYCFLTNGFDEIDLQPHSRLAGVNENEVRANHDLQILTWGPQSGPGLIATRDFSEVFALGHWEYGK YTLAEEYERDMAKGMTNVPFPKNYFPHDDSKLEPLFAWRAHANLLWRNWLNWVYQTTPYDLTEVPQLRAEKKLGTDRSIR HEPGGPRQDDFEPFAHDGYGVIRG >Mature_343_residues PIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISKSPLQVEIDFMKTSTHEATHVS ADHLVKFYENLDALKDNYYDGFVVTGAPVEHMPFEDVDYWDEFKTILDWASTHVFSTMYLCWGAMGALYYRYGIHKVDYP EKIFGVFPQYLQDEYCFLTNGFDEIDLQPHSRLAGVNENEVRANHDLQILTWGPQSGPGLIATRDFSEVFALGHWEYGKY TLAEEYERDMAKGMTNVPFPKNYFPHDDSKLEPLFAWRAHANLLWRNWLNWVYQTTPYDLTEVPQLRAEKKLGTDRSIRH EPGGPRQDDFEPFAHDGYGVIRG
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=302, Percent_Identity=44.7019867549669, Blast_Score=268, Evalue=4e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 39998; Mature: 39866
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISK CCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVEIDFMKTSTHEATHVSADHLVKFYENLDALKDNYYDGFVVTGAPVEHMPFEDVDY CCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHH WDEFKTILDWASTHVFSTMYLCWGAMGALYYRYGIHKVDYPEKIFGVFPQYLQDEYCFLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHCCCEEEEE NGFDEIDLQPHSRLAGVNENEVRANHDLQILTWGPQSGPGLIATRDFSEVFALGHWEYGK CCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHCCCCCCC YTLAEEYERDMAKGMTNVPFPKNYFPHDDSKLEPLFAWRAHANLLWRNWLNWVYQTTPYD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LTEVPQLRAEKKLGTDRSIRHEPGGPRQDDFEPFAHDGYGVIRG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure PIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISK CCCCCCCCCHHHHCCCCCEEEECCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVEIDFMKTSTHEATHVSADHLVKFYENLDALKDNYYDGFVVTGAPVEHMPFEDVDY CCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHH WDEFKTILDWASTHVFSTMYLCWGAMGALYYRYGIHKVDYPEKIFGVFPQYLQDEYCFLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHCCCEEEEE NGFDEIDLQPHSRLAGVNENEVRANHDLQILTWGPQSGPGLIATRDFSEVFALGHWEYGK CCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHCCCCCCC YTLAEEYERDMAKGMTNVPFPKNYFPHDDSKLEPLFAWRAHANLLWRNWLNWVYQTTPYD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LTEVPQLRAEKKLGTDRSIRHEPGGPRQDDFEPFAHDGYGVIRG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]