| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691201
Identifier: 213691201
GI number: 213691201
Start: 337442
End: 339409
Strand: Direct
Name: 213691201
Synonym: Blon_0283
Alternate gene names: NA
Gene position: 337442-339409 (Clockwise)
Preceding gene: 213691192
Following gene: 213691202
Centisome position: 11.91
GC content: 63.11
Gene sequence:
>1968_bases ATGATGATAACGACATGGCGGCAACGGGGCATGGCCATCGTAGCGATGCTGACCGGTCTGATAATAATGGTGGGAGTGGT GTTCGGCTCGGCGAATACGGCGTATGCCGCGACGTTGACGCCCGCCGACGAAAGATATCACGTGACGTTTCCATACAACG ATATGGAATATTACGTCGGTGTCGCGGGGCTGGACGCTTCGGGCAACAAATACTACTGCATCGAAGCGGGGAAACTGAGC GACTATGTGATAGGCCCCACCACGGTGCTTGCCTCCGATGAGAACGCCCGGCGTATGGCATGGATCCTTGACCGGTACCG CGACACGGATGCCGCCACCCATGCGGCGATCGGCATCATCGTGCAGGATCACTTCGGGCGCGATCGGGACGAGTGGGCGA GACAGATGGCGGTCATTCAAGGCCGGTATCCCGAGATCGTGGCGAAGGCGGCCCAGATATGGGATCAATCGGCCGGCATG ACGCCTGCGGGCACGACGGTGGAACGCACCGATGCCGAGGCTTTGCGCAGCGGTTCCATCTTGGTGAAAGTGGTGAACCG CGTCGGTGACGCGATCGCGGGAGTGCCGTTCACCGTCACCTTGCAGGGGCCGGCGCGGTTCGTCCAAGGCGGCAACACGT TCTCGGGGGTGTCGACGAGCGCCGGATCCTCGATCGCGTGGGAGGCGACCGGTGCCGGCGAGGTGACGGCGAACACCACA TACGAGTATGGGCGGATGCACGTCATGGACAGCACTCAGGACATGCTGGCCTTCGATTCGATGGCTTCCGTCGGCGGTTC GTCGTCGACGTTCCAGGTGCGCAAGGATTTCGTTCCGTCGGTGTCCACGCAAGTGTCCGATAAGGTGCTTGATGCGGCTT CGCCGGTGTTCGATGATGTGACCAGCGGCGTGGGGGACGAGGGCAGTCATTGGGTGCCCGGTCTGAAGCTGCAGGCGCGT GGATACTATTTCGACGGGCTCGGCAAGGACGATCTGGGCAAGGTCATCGCGCCGAACGCACGGGAGAGCGCGGACGCTTT TCTCGCCCGGTTGGCGTCCTCGGGTCATAAGCCGAGTGCTTATGGCGAGGCGTCCTTCACCGGTGTGGGGCAACGGGTTC GTGTGCAGGCCATGACCAAGCCGGACGGTGACGCCGCCTATCTGACTCCGAAGACCGGCGGCTTTGGCACCTGGGTGTGG GTGTTCCGGCGGAGCGAGCAAAGCAAACGGGCGCAGGAATACCTTACCGGCGACTGGGTGAGCCCGTTCATGGAGGCTTC GGAAAGCAACGTGGGGCGCGGGAAGGTCGAAGTCATGTCGACGGTTACCGAACATTCAGCGGATATCGGCGCCGAACTCA GCGACACCATCACCGTATCGGGGTTCCCGGCGGACCACGGCCAGTTCATGGGCGATGAAACCTATGGTTTCACGGCGGAT CAGCCGTATGCGACGGTGAGTGTATGGTGGTCCGGCGATCCCGACAATCCCTCCAACGATGAGGCGTACAAGCCGTCCGG GGGAGAGGTTCCCACGGAAGACGACAACCACCGGTTGCTGGCCACCTGGGAGATTCCCGCGATGAACGGCACGTTCAAAA TCGGCGCCGGGGCGTTGGACGCGCATGGCGCTCCCATGCATCTGACCGCCGAACGGCATGGGTGGTACGTGTTCGTCTGG CGGTTCGAGGGGGATGACCGTGTTTCCCCGGCGTCCAGCCGGTATGACGATGCCTGGGAGCGTGTGCGGGTGCTTCCCCC ATGCGAGCCGGAGAAACCGTGCGAACCGGAGAAACCCGAGACGCCGCCGGCGCCGGCGGAGACAACCACGCCCAACCCTC GCCCGTCACTGCCCGTCACGGGTGGCGATGTGTCGCTTGCCTCGGTTCTGGCCGTGTCGGTCCTGGCGATAGGCGCCATA CTGTCCATCGTCGTTCGGTGGCGTCGTCGCTATGACCGATTCAACTGA
Upstream 100 bases:
>100_bases ACATAGGCCGAAAAACCGGCTGTAGCGAATGAAAATCTGCCATGATCGTGGCCTACCCGCACACAGTGCAGTATGCGGGG AACGTACCAGGAAAGGACGA
Downstream 100 bases:
>100_bases TTTTGCCGAGGATTCCCCCGCCTCTTAGCGGAAGCGTGGGCGGGGGATGAATCGGCTTTCCTTTTATGCTATACCGGCAT TCAGTCGTACCTATCGGAAG
Product: LPXTG-motif cell wall anchor domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MMITTWRQRGMAIVAMLTGLIIMVGVVFGSANTAYAATLTPADERYHVTFPYNDMEYYVGVAGLDASGNKYYCIEAGKLS DYVIGPTTVLASDENARRMAWILDRYRDTDAATHAAIGIIVQDHFGRDRDEWARQMAVIQGRYPEIVAKAAQIWDQSAGM TPAGTTVERTDAEALRSGSILVKVVNRVGDAIAGVPFTVTLQGPARFVQGGNTFSGVSTSAGSSIAWEATGAGEVTANTT YEYGRMHVMDSTQDMLAFDSMASVGGSSSTFQVRKDFVPSVSTQVSDKVLDAASPVFDDVTSGVGDEGSHWVPGLKLQAR GYYFDGLGKDDLGKVIAPNARESADAFLARLASSGHKPSAYGEASFTGVGQRVRVQAMTKPDGDAAYLTPKTGGFGTWVW VFRRSEQSKRAQEYLTGDWVSPFMEASESNVGRGKVEVMSTVTEHSADIGAELSDTITVSGFPADHGQFMGDETYGFTAD QPYATVSVWWSGDPDNPSNDEAYKPSGGEVPTEDDNHRLLATWEIPAMNGTFKIGAGALDAHGAPMHLTAERHGWYVFVW RFEGDDRVSPASSRYDDAWERVRVLPPCEPEKPCEPEKPETPPAPAETTTPNPRPSLPVTGGDVSLASVLAVSVLAIGAI LSIVVRWRRRYDRFN
Sequences:
>Translated_655_residues MMITTWRQRGMAIVAMLTGLIIMVGVVFGSANTAYAATLTPADERYHVTFPYNDMEYYVGVAGLDASGNKYYCIEAGKLS DYVIGPTTVLASDENARRMAWILDRYRDTDAATHAAIGIIVQDHFGRDRDEWARQMAVIQGRYPEIVAKAAQIWDQSAGM TPAGTTVERTDAEALRSGSILVKVVNRVGDAIAGVPFTVTLQGPARFVQGGNTFSGVSTSAGSSIAWEATGAGEVTANTT YEYGRMHVMDSTQDMLAFDSMASVGGSSSTFQVRKDFVPSVSTQVSDKVLDAASPVFDDVTSGVGDEGSHWVPGLKLQAR GYYFDGLGKDDLGKVIAPNARESADAFLARLASSGHKPSAYGEASFTGVGQRVRVQAMTKPDGDAAYLTPKTGGFGTWVW VFRRSEQSKRAQEYLTGDWVSPFMEASESNVGRGKVEVMSTVTEHSADIGAELSDTITVSGFPADHGQFMGDETYGFTAD QPYATVSVWWSGDPDNPSNDEAYKPSGGEVPTEDDNHRLLATWEIPAMNGTFKIGAGALDAHGAPMHLTAERHGWYVFVW RFEGDDRVSPASSRYDDAWERVRVLPPCEPEKPCEPEKPETPPAPAETTTPNPRPSLPVTGGDVSLASVLAVSVLAIGAI LSIVVRWRRRYDRFN >Mature_655_residues MMITTWRQRGMAIVAMLTGLIIMVGVVFGSANTAYAATLTPADERYHVTFPYNDMEYYVGVAGLDASGNKYYCIEAGKLS DYVIGPTTVLASDENARRMAWILDRYRDTDAATHAAIGIIVQDHFGRDRDEWARQMAVIQGRYPEIVAKAAQIWDQSAGM TPAGTTVERTDAEALRSGSILVKVVNRVGDAIAGVPFTVTLQGPARFVQGGNTFSGVSTSAGSSIAWEATGAGEVTANTT YEYGRMHVMDSTQDMLAFDSMASVGGSSSTFQVRKDFVPSVSTQVSDKVLDAASPVFDDVTSGVGDEGSHWVPGLKLQAR GYYFDGLGKDDLGKVIAPNARESADAFLARLASSGHKPSAYGEASFTGVGQRVRVQAMTKPDGDAAYLTPKTGGFGTWVW VFRRSEQSKRAQEYLTGDWVSPFMEASESNVGRGKVEVMSTVTEHSADIGAELSDTITVSGFPADHGQFMGDETYGFTAD QPYATVSVWWSGDPDNPSNDEAYKPSGGEVPTEDDNHRLLATWEIPAMNGTFKIGAGALDAHGAPMHLTAERHGWYVFVW RFEGDDRVSPASSRYDDAWERVRVLPPCEPEKPCEPEKPETPPAPAETTTPNPRPSLPVTGGDVSLASVLAVSVLAIGAI LSIVVRWRRRYDRFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70784; Mature: 70784
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMITTWRQRGMAIVAMLTGLIIMVGVVFGSANTAYAATLTPADERYHVTFPYNDMEYYVG CEEECCHHCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCEEEEE VAGLDASGNKYYCIEAGKLSDYVIGPTTVLASDENARRMAWILDRYRDTDAATHAAIGII EEEECCCCCEEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCHHHHEEEEEE VQDHFGRDRDEWARQMAVIQGRYPEIVAKAAQIWDQSAGMTPAGTTVERTDAEALRSGSI EECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCH LVKVVNRVGDAIAGVPFTVTLQGPARFVQGGNTFSGVSTSAGSSIAWEATGAGEVTANTT HHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEECCCCCCCCCEEEEEECCCCCEEECCC YEYGRMHVMDSTQDMLAFDSMASVGGSSSTFQVRKDFVPSVSTQVSDKVLDAASPVFDDV EECCEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHH TSGVGDEGSHWVPGLKLQARGYYFDGLGKDDLGKVIAPNARESADAFLARLASSGHKPSA HCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC YGEASFTGVGQRVRVQAMTKPDGDAAYLTPKTGGFGTWVWVFRRSEQSKRAQEYLTGDWV CCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCHHH SPFMEASESNVGRGKVEVMSTVTEHSADIGAELSDTITVSGFPADHGQFMGDETYGFTAD HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC QPYATVSVWWSGDPDNPSNDEAYKPSGGEVPTEDDNHRLLATWEIPAMNGTFKIGAGALD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC AHGAPMHLTAERHGWYVFVWRFEGDDRVSPASSRYDDAWERVRVLPPCEPEKPCEPEKPE CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCC TPPAPAETTTPNPRPSLPVTGGDVSLASVLAVSVLAIGAILSIVVRWRRRYDRFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMITTWRQRGMAIVAMLTGLIIMVGVVFGSANTAYAATLTPADERYHVTFPYNDMEYYVG CEEECCHHCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCEEEEE VAGLDASGNKYYCIEAGKLSDYVIGPTTVLASDENARRMAWILDRYRDTDAATHAAIGII EEEECCCCCEEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCHHHHEEEEEE VQDHFGRDRDEWARQMAVIQGRYPEIVAKAAQIWDQSAGMTPAGTTVERTDAEALRSGSI EECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCH LVKVVNRVGDAIAGVPFTVTLQGPARFVQGGNTFSGVSTSAGSSIAWEATGAGEVTANTT HHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEECCCCCCCCCEEEEEECCCCCEEECCC YEYGRMHVMDSTQDMLAFDSMASVGGSSSTFQVRKDFVPSVSTQVSDKVLDAASPVFDDV EECCEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHH TSGVGDEGSHWVPGLKLQARGYYFDGLGKDDLGKVIAPNARESADAFLARLASSGHKPSA HCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC YGEASFTGVGQRVRVQAMTKPDGDAAYLTPKTGGFGTWVWVFRRSEQSKRAQEYLTGDWV CCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCHHH SPFMEASESNVGRGKVEVMSTVTEHSADIGAELSDTITVSGFPADHGQFMGDETYGFTAD HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC QPYATVSVWWSGDPDNPSNDEAYKPSGGEVPTEDDNHRLLATWEIPAMNGTFKIGAGALD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC AHGAPMHLTAERHGWYVFVWRFEGDDRVSPASSRYDDAWERVRVLPPCEPEKPCEPEKPE CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCC TPPAPAETTTPNPRPSLPVTGGDVSLASVLAVSVLAIGAILSIVVRWRRRYDRFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA