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The map label for this gene is gatC [H]

Identifier: 213691178

GI number: 213691178

Start: 303297

End: 303647

Strand: Direct

Name: gatC [H]

Synonym: Blon_0258

Alternate gene names: 213691178

Gene position: 303297-303647 (Clockwise)

Preceding gene: 213691175

Following gene: 213691179

Centisome position: 10.71

GC content: 60.97

Gene sequence:

>351_bases
ATGAGGCTTCCCGACAACTGCGTGTCACATACGGCTCATATAGTTATGGCCATGCCAACATTTTCACGCGAAGAAATCGT
GCATTTGGGCGATCTGGCCCGAATCGCGCTCACCGATGAGGAAATCACCCGTCTGCAGGGCGAACTGAACGTCATCGCAG
ACTCCATCAACAAGGTCCAGGAAGTCGCCTCCGACGATGTGCCGCCGACCGCCAACCCGGTTCCGCTGGAAGCCTACCTG
CGCCCGGACGTCGCCGAAACCCCGCTCACGCAGGAAGAGGCGCTCGCCGGTGGCCCGAAGACCGAGGCCGGCATGTTCGT
GGCACCGCGAATCCTGGGAAGCGAGGAGTAA

Upstream 100 bases:

>100_bases
GTCCGGCAACGGTTTTGCCCCGCCGAAGAAGCCAGCAGCGGGGCAAATGCTCGACCGGCTTGAGCTTCTGATTCGCTGAA
GGGCTCCAGTAGGCGGGAAA

Downstream 100 bases:

>100_bases
TCGATGAGCAACGAAACCGCAACTCTTGTCAAACTGTCTGCTGCCGAGCAGGCCGCTGCCATCAAGAAGGGCGACGTCAC
CTCCCGTGAGCTCGTCGAAG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRLPDNCVSHTAHIVMAMPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYL
RPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE

Sequences:

>Translated_116_residues
MRLPDNCVSHTAHIVMAMPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYL
RPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE
>Mature_116_residues
MRLPDNCVSHTAHIVMAMPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYL
RPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 12543; Mature: 12543

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPDNCVSHTAHIVMAMPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQ
CCCCHHHHHHHHEEEEECCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
EVASDDVPPTANPVPLEAYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE
HHHCCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRLPDNCVSHTAHIVMAMPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQ
CCCCHHHHHHHHEEEEECCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
EVASDDVPPTANPVPLEAYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE
HHHCCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]