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The map label for this gene is rmuC [H]

Identifier: 213691173

GI number: 213691173

Start: 298370

End: 299794

Strand: Direct

Name: rmuC [H]

Synonym: Blon_0253

Alternate gene names: 213691173

Gene position: 298370-299794 (Clockwise)

Preceding gene: 213691172

Following gene: 213691174

Centisome position: 10.53

GC content: 58.11

Gene sequence:

>1425_bases
ATGTTTGAGCAAATAGGAAACGTGATTATCGTCATCGTCGTGCTAGTGGTTGGTGCAGGGCTTGGCCTCTTCGCCGGCTT
CGTGCTGGGGCGCCATAAGGGTCAGGAGATGGCTCGAGGCGTCAAAAGCGAGGAGCTGGAGGAGGCCAAGACCTCGCTGG
AGAATGCGCGATTCGAGAATGCTGAGCTCAGTGCTCGCAATGCTGCCGCACAGGCTCAGATTGAAGGCGTGAACCAGCAA
TTGGCTTTCGCCAAGTCACAACTTGCCCAGGCGCAGCAGGCTGAGCAGGTTCGCATTCAGCAGGAACGTGAGCGTGCGGC
TGCGGAGGCGGAACGGAAGCGTCAGGCGGATGCTCGGGACGCCGAGGCCAAGCGTGCTGAACAGGAAGCGCGTTTGAAAG
AACAGAGCAAGGTGCTCGAGGCGCTTGCGCCAGTGGCCAAAAATCTTGATACCTTGCAGAACAAGGTCACGCAGATCGAA
GAGGGCCGCAAGAGGGAAATGGGCGCATTGGGAGCCCAACTCAAGGGGCTCAACGACCAGCAGGCCCGTTTGGACAAGGA
GACCAGCTCCCTGTCCGCCGCATTGCGCAATAACAAGGTGCGTGGCGCGTGGGGCGAGGCCCAGCTCAAGAACATTGTCG
AATCCGCCGGATTGCTGGAACATGTCGATTTCGATACCCAGGTGGTGGTCACGGATGCCGATGGGCGTACGTTGCGCCCG
GATATGATCGTGCATCTGCCGGGAGGCAAGACCATTCCGATTGATGCCAAAGTGCCTTATGCCGATTACCAGCGTGCCTG
CGAAATCCCGGACACCGCCAGTCCCGAGGATATTGCCCGCCGCGATGATTTGCTGCGGTCCCATGCCAAGGCGTTGCGCG
AGCATGTACGTGCTCTCGGCGAAAAGGCCTATTGGAATGCCTTTGATGTGGCACCCGATTTTGTGGTGGCCTTCATCCCC
AATGAGGCACTATTGCAGGCCGCGCTCGAAGCCGATCCCACACTGATGGATGATGCGTTCTCTCGCAAAGTGGCGCTCAC
CTCGCCGGTCACGCTGTGGGCCGTGCTGAAATCCGTCGCCTATGCCTGGCAGCAGCAGTCGCTCACCGATGACGCCAAGC
AGCTGTTCGATCTGTCCCGAGAACTGTACGAACGGTTCTCCACGTTGGGTGATTATGCCATCAAATTGGGCACCCAGATT
ACTAAGACGGTCAGCGCCTACAACAAGTTCGCGTCCAGCTTGGAACGCCGTGTGTTGCCCACCGCTCGCAAGCTGCAAAA
AATCGAACCGACCAAGATCATCGAGGAAGTACCGATCATCGAATCAGATAAAGGCAATGTGAGCGAACTGTCCGCCCCTG
AAGTGGTGCCGGCCGATGAGGGTGATACTCATCTGACTGCCTCAGGCGATAGTCTGGAGTCATGA

Upstream 100 bases:

>100_bases
AGCGTCCAATGTGGGCTGCTGAGCGTCCGTTTAACGGCTTGAAATCGTCGAGTTCGGTAAAAATTTACCGTCATTCACCA
TCGATGACATACTGGGTACC

Downstream 100 bases:

>100_bases
CTGAATCTGGATTCCGCCCCACTGGTACCCCGGACCTCGCCGTCGCGAAGAGCCATAATGACTTTGCCATGCTGGAGCCG
CGTGAGCAGCTAGCCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MFEQIGNVIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFENAELSARNAAAQAQIEGVNQQ
LAFAKSQLAQAQQAEQVRIQQERERAAAEAERKRQADARDAEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIE
EGRKREMGALGAQLKGLNDQQARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRP
DMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALGEKAYWNAFDVAPDFVVAFIP
NEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQI
TKTVSAYNKFASSLERRVLPTARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES

Sequences:

>Translated_474_residues
MFEQIGNVIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFENAELSARNAAAQAQIEGVNQQ
LAFAKSQLAQAQQAEQVRIQQERERAAAEAERKRQADARDAEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIE
EGRKREMGALGAQLKGLNDQQARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRP
DMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALGEKAYWNAFDVAPDFVVAFIP
NEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQI
TKTVSAYNKFASSLERRVLPTARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES
>Mature_474_residues
MFEQIGNVIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFENAELSARNAAAQAQIEGVNQQ
LAFAKSQLAQAQQAEQVRIQQERERAAAEAERKRQADARDAEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIE
EGRKREMGALGAQLKGLNDQQARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRP
DMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALGEKAYWNAFDVAPDFVVAFIP
NEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQI
TKTVSAYNKFASSLERRVLPTARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=418, Percent_Identity=26.0765550239234, Blast_Score=141, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 52069; Mature: 52069

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQIGNVIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFEN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCC
AELSARNAAAQAQIEGVNQQLAFAKSQLAQAQQAEQVRIQQERERAAAEAERKRQADARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIEEGRKREMGALGAQLKGLNDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRP
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCEECC
DMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALG
CEEEECCCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAYWNAFDVAPDFVVAFIPNEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVA
HHHCCCHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHCCEECCCHHHHHHHHHHHH
YAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQITKTVSAYNKFASSLERRVLP
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
TARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MFEQIGNVIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFEN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCC
AELSARNAAAQAQIEGVNQQLAFAKSQLAQAQQAEQVRIQQERERAAAEAERKRQADARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIEEGRKREMGALGAQLKGLNDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRP
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCEECC
DMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALG
CEEEECCCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAYWNAFDVAPDFVVAFIPNEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVA
HHHCCCHHCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHCCEECCCHHHHHHHHHHHH
YAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQITKTVSAYNKFASSLERRVLP
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
TARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA