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The map label for this gene is narL [H]

Identifier: 213691164

GI number: 213691164

Start: 287183

End: 287785

Strand: Direct

Name: narL [H]

Synonym: Blon_0243

Alternate gene names: 213691164

Gene position: 287183-287785 (Clockwise)

Preceding gene: 213691159

Following gene: 213691165

Centisome position: 10.14

GC content: 51.91

Gene sequence:

>603_bases
ATGGATAACGACCGGCTGGCATTGCGATTGCTTTCAGCCAGTCTCAAACGCCTACTTCCCGGCTGTACGGTTCTTGCACC
AGTCGATACTGGCGCTGAGGCCATAGCCGTCTGTACTTCGCATCACTGTCCGGATCTGTTGTTGGCGGATGTCTCCATGT
CTGATATCAACGGATTGGTGGTGTGCCGGACGATTAGAAAAGAGAATTGGAAGACATCCGTACTCATGATGACATCATTC
AGCGTCGCCGAATATGCTGCAGAAGCGGTGGCTTCGGGAGCCCAGGGAATCATACATAAGGACAATCCGAAAACAATCGC
CGAGGCTTTGCTGCAGATAAAGGAAACAGGAATCTGTTCTGATCGTTTTCTGAATGCCCACGATTCGTTTTTGCGGCTGA
AGTCAGAGAAGAACAAGGATCTGTCCCCTCGTGAAATGGAAATCGTTGATCGATGGGCGCGAGGGAGATCGATGTCCGAC
ATAGCGGAGGAATTATCGATCGGTCAGACCACGGTGCGGACCCATCTTGAACATGCCGCGTCCAAGCTGGGGGTAGCGAA
CAACCGTGCATTGATTTCCGCCTGGATGCATCTCAATCGCTGA

Upstream 100 bases:

>100_bases
GTATCATATGCGTGTCAGACTTCCGATGACCCTTGGATGTCCGTTCCTGTTTCGCCACATTTTAGGGGGATTCATGAGAT
CTTCACCGACACTCTTGATC

Downstream 100 bases:

>100_bases
TGAGGATTTCCATGAATACGGCGTTTACGTTTCCGTCAAAAATAATTCGGCGCTATGTGGCACATCCCTGCTTGTCCCTT
CTGTCGCTGCTGGGGCTGTC

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDNDRLALRLLSASLKRLLPGCTVLAPVDTGAEAIAVCTSHHCPDLLLADVSMSDINGLVVCRTIRKENWKTSVLMMTSF
SVAEYAAEAVASGAQGIIHKDNPKTIAEALLQIKETGICSDRFLNAHDSFLRLKSEKNKDLSPREMEIVDRWARGRSMSD
IAEELSIGQTTVRTHLEHAASKLGVANNRALISAWMHLNR

Sequences:

>Translated_200_residues
MDNDRLALRLLSASLKRLLPGCTVLAPVDTGAEAIAVCTSHHCPDLLLADVSMSDINGLVVCRTIRKENWKTSVLMMTSF
SVAEYAAEAVASGAQGIIHKDNPKTIAEALLQIKETGICSDRFLNAHDSFLRLKSEKNKDLSPREMEIVDRWARGRSMSD
IAEELSIGQTTVRTHLEHAASKLGVANNRALISAWMHLNR
>Mature_200_residues
MDNDRLALRLLSASLKRLLPGCTVLAPVDTGAEAIAVCTSHHCPDLLLADVSMSDINGLVVCRTIRKENWKTSVLMMTSF
SVAEYAAEAVASGAQGIIHKDNPKTIAEALLQIKETGICSDRFLNAHDSFLRLKSEKNKDLSPREMEIVDRWARGRSMSD
IAEELSIGQTTVRTHLEHAASKLGVANNRALISAWMHLNR

Specific function: Probable member of the two-component regulatory system NarS/NarL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21963; Mature: 21963

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNDRLALRLLSASLKRLLPGCTVLAPVDTGAEAIAVCTSHHCPDLLLADVSMSDINGLV
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCHHCCCCEE
VCRTIRKENWKTSVLMMTSFSVAEYAAEAVASGAQGIIHKDNPKTIAEALLQIKETGICS
EEEEHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCCH
DRFLNAHDSFLRLKSEKNKDLSPREMEIVDRWARGRSMSDIAEELSIGQTTVRTHLEHAA
HHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
SKLGVANNRALISAWMHLNR
HHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDNDRLALRLLSASLKRLLPGCTVLAPVDTGAEAIAVCTSHHCPDLLLADVSMSDINGLV
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCHHCCCCEE
VCRTIRKENWKTSVLMMTSFSVAEYAAEAVASGAQGIIHKDNPKTIAEALLQIKETGICS
EEEEHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCCH
DRFLNAHDSFLRLKSEKNKDLSPREMEIVDRWARGRSMSDIAEELSIGQTTVRTHLEHAA
HHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
SKLGVANNRALISAWMHLNR
HHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]