| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691149
Identifier: 213691149
GI number: 213691149
Start: 274103
End: 275584
Strand: Direct
Name: 213691149
Synonym: Blon_0228
Alternate gene names: NA
Gene position: 274103-275584 (Clockwise)
Preceding gene: 213691148
Following gene: 213691150
Centisome position: 9.68
GC content: 63.5
Gene sequence:
>1482_bases ATGGCAAGCAACGTTTCACGCGATGTTTCGCAAGACCAATCGTCCGTGGCACAGGCCCGCAAACCGTGGTATGCGTTCGC CACCGTGGCCGCAGGCCGCTTCGTGCGGTTTGCATCCCGCGTCACCAAACATGGCGGTTCGGCTTTGCCCGGCAAAGTCG TAGAAAAGATTGACCCTGGCTTCCTGACCCGTACGCTCGGGCAGTTGCCGCTTGGCGTGGTATTGGTGTCCGGCACGAAC GGCAAGACCACCACCACCCGCATGGTCGCCTCGATGCTCTCCGATCTGGGATTGAAGGTGTTCACCAATCCGACCGGCTC GAACTTCGTGCGCGGCGTGGTTTCCGCACTGCTTACCGAGGTCACGCTCGGCGGCAAATTGGACGCGGACATCGCCGTAC TTGAGCTCGATGAGGCGTACGCCGTCCACTTCGTCAAGCAGGTCAAGCCCCGTTATGCGTTGCTGCTGAACGTGATGCGC GATCAGCTTGACCGATTCGGTGAAATCGACACCACGGCCAAACTGCTCAGCCATGTGGCTGCGGCGACTACCGGCACTGT GGTACTGAACCGCGAGGACCCGCGTATCGCCGCGCTCGCCGCGAAGGCCCCGGCTGGCACCACAGTGCGATACTTCGGCC TCGCCGACGATTTGCGCCACTATTTCCCGTCCGATGACGACATGGCCACGACCGTGTCGGTGGAAGGTGTGGCCGGGCCG CTCCCTTCAGTCAGTACTCCCCTCAGTCCGCTTCGCGGACAGCTCCCCTCGGAGAGGGAAGCTGCCGCAGGCATGGCAGA ACTCCCCGCTGACGTGACACTTACCGCCGTGGGCGACCACAAGGCCACCTTCCAGATGGACGGCCAGGACTACGCCACCG ACGTCAAACTTGAAGGCGTCTACAACTTGTACAACGCGGCCGCCGCGCTCGCCGTGGTACGTGCGGTGATGCAAGACAAT GCCGCCGCATCCAAGGCCACCGCCGCAGCCAACGCCTGCGCCGTGTCCGCCGACGAGCTCATCGCCGCCGTTTCCCGCGT CACGCCGGCTTTCGGCCGTGGCGAGGTCATCGACATCAACGGTTCCCCGGTCGAACTGCTGCTGGTCAAGAACCCGATGG GCTTCCGCCTCTCGCTCGCCAGCTTCGACCCGGCCAACGCGGACACCATGATCGCCATCAACGACGAATATGCCGACGGC CGCGACATGAGCTGGCTATGGGACGTGGACTTCACCTCTTTGCGCGCGTCCGGTGTCGCCATGGTCTCCGGCGTGCGCGC CTGGGACATGGCACTGCGCTTGGGGTATGACCAAGTGCCAGTCGCCGATACGAACACCGACCTCGAACAGGCCGTCACCG CATTCGTCAACGCCAATCCCGGCACACGCAAGCACATCTACTGCACCTACACCGCCATGCTCAAAACCCGCGCCGTACTG GGCCGCATCACCGAAGTACGGGACGCTGGCGTGGGCAAGTAA
Upstream 100 bases:
>100_bases GTAACGGCCCGACCGAAACCTTCCACCTCGCCTTCCTCGGTGCCACGTCCAAATTCAAGGACATGCCGCAGGACTACAAC AGCAATCAGGGGGTGTGATG
Downstream 100 bases:
>100_bases CCACCCTCTAGCGCCCGCGCGCCACCTCTCGCCTGCGGGAGGACATGGTGAGGAATAAGACTTCCCCTTAGCGGGAAGAC ATCGACAAGGAGAACGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Mur Ligase; Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Conserved Domain Protein; Mur Ligase Middle Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; Cell Wall Biosynthesis Protein Mur Ligase Family; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Mur Ligase Middle Domain-Containing Protein; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MASNVSRDVSQDQSSVAQARKPWYAFATVAAGRFVRFASRVTKHGGSALPGKVVEKIDPGFLTRTLGQLPLGVVLVSGTN GKTTTTRMVASMLSDLGLKVFTNPTGSNFVRGVVSALLTEVTLGGKLDADIAVLELDEAYAVHFVKQVKPRYALLLNVMR DQLDRFGEIDTTAKLLSHVAAATTGTVVLNREDPRIAALAAKAPAGTTVRYFGLADDLRHYFPSDDDMATTVSVEGVAGP LPSVSTPLSPLRGQLPSEREAAAGMAELPADVTLTAVGDHKATFQMDGQDYATDVKLEGVYNLYNAAAALAVVRAVMQDN AAASKATAAANACAVSADELIAAVSRVTPAFGRGEVIDINGSPVELLLVKNPMGFRLSLASFDPANADTMIAINDEYADG RDMSWLWDVDFTSLRASGVAMVSGVRAWDMALRLGYDQVPVADTNTDLEQAVTAFVNANPGTRKHIYCTYTAMLKTRAVL GRITEVRDAGVGK
Sequences:
>Translated_493_residues MASNVSRDVSQDQSSVAQARKPWYAFATVAAGRFVRFASRVTKHGGSALPGKVVEKIDPGFLTRTLGQLPLGVVLVSGTN GKTTTTRMVASMLSDLGLKVFTNPTGSNFVRGVVSALLTEVTLGGKLDADIAVLELDEAYAVHFVKQVKPRYALLLNVMR DQLDRFGEIDTTAKLLSHVAAATTGTVVLNREDPRIAALAAKAPAGTTVRYFGLADDLRHYFPSDDDMATTVSVEGVAGP LPSVSTPLSPLRGQLPSEREAAAGMAELPADVTLTAVGDHKATFQMDGQDYATDVKLEGVYNLYNAAAALAVVRAVMQDN AAASKATAAANACAVSADELIAAVSRVTPAFGRGEVIDINGSPVELLLVKNPMGFRLSLASFDPANADTMIAINDEYADG RDMSWLWDVDFTSLRASGVAMVSGVRAWDMALRLGYDQVPVADTNTDLEQAVTAFVNANPGTRKHIYCTYTAMLKTRAVL GRITEVRDAGVGK >Mature_492_residues ASNVSRDVSQDQSSVAQARKPWYAFATVAAGRFVRFASRVTKHGGSALPGKVVEKIDPGFLTRTLGQLPLGVVLVSGTNG KTTTTRMVASMLSDLGLKVFTNPTGSNFVRGVVSALLTEVTLGGKLDADIAVLELDEAYAVHFVKQVKPRYALLLNVMRD QLDRFGEIDTTAKLLSHVAAATTGTVVLNREDPRIAALAAKAPAGTTVRYFGLADDLRHYFPSDDDMATTVSVEGVAGPL PSVSTPLSPLRGQLPSEREAAAGMAELPADVTLTAVGDHKATFQMDGQDYATDVKLEGVYNLYNAAAALAVVRAVMQDNA AASKATAAANACAVSADELIAAVSRVTPAFGRGEVIDINGSPVELLLVKNPMGFRLSLASFDPANADTMIAINDEYADGR DMSWLWDVDFTSLRASGVAMVSGVRAWDMALRLGYDQVPVADTNTDLEQAVTAFVNANPGTRKHIYCTYTAMLKTRAVLG RITEVRDAGVGK
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52247; Mature: 52116
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNVSRDVSQDQSSVAQARKPWYAFATVAAGRFVRFASRVTKHGGSALPGKVVEKIDPG CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC FLTRTLGQLPLGVVLVSGTNGKTTTTRMVASMLSDLGLKVFTNPTGSNFVRGVVSALLTE HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH VTLGGKLDADIAVLELDEAYAVHFVKQVKPRYALLLNVMRDQLDRFGEIDTTAKLLSHVA HHCCCCCCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AATTGTVVLNREDPRIAALAAKAPAGTTVRYFGLADDLRHYFPSDDDMATTVSVEGVAGP HHCCCEEEEECCCCCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCC LPSVSTPLSPLRGQLPSEREAAAGMAELPADVTLTAVGDHKATFQMDGQDYATDVKLEGV CCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEECHH YNLYNAAAALAVVRAVMQDNAAASKATAAANACAVSADELIAAVSRVTPAFGRGEVIDIN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEC GSPVELLLVKNPMGFRLSLASFDPANADTMIAINDEYADGRDMSWLWDVDFTSLRASGVA CCCEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHCCCH MVSGVRAWDMALRLGYDQVPVADTNTDLEQAVTAFVNANPGTRKHIYCTYTAMLKTRAVL HHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHH GRITEVRDAGVGK HHHHHHHHCCCCC >Mature Secondary Structure ASNVSRDVSQDQSSVAQARKPWYAFATVAAGRFVRFASRVTKHGGSALPGKVVEKIDPG CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC FLTRTLGQLPLGVVLVSGTNGKTTTTRMVASMLSDLGLKVFTNPTGSNFVRGVVSALLTE HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH VTLGGKLDADIAVLELDEAYAVHFVKQVKPRYALLLNVMRDQLDRFGEIDTTAKLLSHVA HHCCCCCCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AATTGTVVLNREDPRIAALAAKAPAGTTVRYFGLADDLRHYFPSDDDMATTVSVEGVAGP HHCCCEEEEECCCCCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCC LPSVSTPLSPLRGQLPSEREAAAGMAELPADVTLTAVGDHKATFQMDGQDYATDVKLEGV CCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEECHH YNLYNAAAALAVVRAVMQDNAAASKATAAANACAVSADELIAAVSRVTPAFGRGEVIDIN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEC GSPVELLLVKNPMGFRLSLASFDPANADTMIAINDEYADGRDMSWLWDVDFTSLRASGVA CCCEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHCCCH MVSGVRAWDMALRLGYDQVPVADTNTDLEQAVTAFVNANPGTRKHIYCTYTAMLKTRAVL HHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHH GRITEVRDAGVGK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA