| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691115
Identifier: 213691115
GI number: 213691115
Start: 231009
End: 231722
Strand: Direct
Name: 213691115
Synonym: Blon_0194
Alternate gene names: NA
Gene position: 231009-231722 (Clockwise)
Preceding gene: 213691112
Following gene: 213691116
Centisome position: 8.15
GC content: 58.12
Gene sequence:
>714_bases ATGGCACATGAATATGGCAAGGAAACGTTGTCGCTCGAGTTCAAAAGCGATTTGAAGCGTCTGCCAGATGACGATCTACT TGATGCCGTCGTGGCGTTGGCGAACTCGGATGGCGGTACGGTGTATATGGGCGTCGAGGATGACGGCACGCCGACCGGCA TCGACAAAGTACATCAGGATGCGGTCGGTTTGTCGGCGATGATTGCCAACCGTACAGTTCCTCCGGTTTCCGCTCGTGCG CAGATCGTCGGGACGGAGAAGACGCCGGTGATGCAGATCGATGTGCCGAAATCCCGCAGCGTGGTCTCGACCAAGTCGGG CAAGGTGTTGCGACGCCGTATGAAGGTGGATGGTACGCCGGAGAGCGTGCCGATGTACCCGTACGAGATCGCCACGCGCC TGTCCGATTTGGGACGTTTGGACTTTTCCGCACAGCCGGTGCCGGATGCGACCCGTGATGATTTCGATCCCCTTGAACGC GACCGTCTGCGCCGGATTATCGGCACCTACCAATCCAGTGACCGTAATTTGTTGGAACTGACCGATGAGGAGCTGGAGAA ATCCCTGCAAGCGGATGTCATGGAACTGCTGCATGTCGATGCGAACCAGGCGTACTACCAGCTGTCCAAGCTCGTTAAGG GTGGGAAGCTGGGGGTCATTGGCCGTGGCAAGGGGGCGCGCTATACGATCGGTGGCTTTACCGGGCGAAAGTGA
Upstream 100 bases:
>100_bases CGCTGAATGTTTCACTGAATACACTGAATTCAGTTATTAAACATTGAATTCAGTGTAAAATTCAGTGTATCAAGAAGAAT GCGTTGGGTTGGATCCCTTT
Downstream 100 bases:
>100_bases TGTGCTGGCGGATGTGCCTGTATGGATGCTTTGTGCTGGGCATCGTCCGAACTTGGGAAGTCGTTTCGGTACTTAGGAAG GTACCTAGGAACCTAGGAAG
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAHEYGKETLSLEFKSDLKRLPDDDLLDAVVALANSDGGTVYMGVEDDGTPTGIDKVHQDAVGLSAMIANRTVPPVSARA QIVGTEKTPVMQIDVPKSRSVVSTKSGKVLRRRMKVDGTPESVPMYPYEIATRLSDLGRLDFSAQPVPDATRDDFDPLER DRLRRIIGTYQSSDRNLLELTDEELEKSLQADVMELLHVDANQAYYQLSKLVKGGKLGVIGRGKGARYTIGGFTGRK
Sequences:
>Translated_237_residues MAHEYGKETLSLEFKSDLKRLPDDDLLDAVVALANSDGGTVYMGVEDDGTPTGIDKVHQDAVGLSAMIANRTVPPVSARA QIVGTEKTPVMQIDVPKSRSVVSTKSGKVLRRRMKVDGTPESVPMYPYEIATRLSDLGRLDFSAQPVPDATRDDFDPLER DRLRRIIGTYQSSDRNLLELTDEELEKSLQADVMELLHVDANQAYYQLSKLVKGGKLGVIGRGKGARYTIGGFTGRK >Mature_236_residues AHEYGKETLSLEFKSDLKRLPDDDLLDAVVALANSDGGTVYMGVEDDGTPTGIDKVHQDAVGLSAMIANRTVPPVSARAQ IVGTEKTPVMQIDVPKSRSVVSTKSGKVLRRRMKVDGTPESVPMYPYEIATRLSDLGRLDFSAQPVPDATRDDFDPLERD RLRRIIGTYQSSDRNLLELTDEELEKSLQADVMELLHVDANQAYYQLSKLVKGGKLGVIGRGKGARYTIGGFTGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26010; Mature: 25879
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHEYGKETLSLEFKSDLKRLPDDDLLDAVVALANSDGGTVYMGVEDDGTPTGIDKVHQD CCCCCCCHHEEEEHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHH AVGLSAMIANRTVPPVSARAQIVGTEKTPVMQIDVPKSRSVVSTKSGKVLRRRMKVDGTP HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCC ESVPMYPYEIATRLSDLGRLDFSAQPVPDATRDDFDPLERDRLRRIIGTYQSSDRNLLEL CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHC TDEELEKSLQADVMELLHVDANQAYYQLSKLVKGGKLGVIGRGKGARYTIGGFTGRK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure AHEYGKETLSLEFKSDLKRLPDDDLLDAVVALANSDGGTVYMGVEDDGTPTGIDKVHQD CCCCCCHHEEEEHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHH AVGLSAMIANRTVPPVSARAQIVGTEKTPVMQIDVPKSRSVVSTKSGKVLRRRMKVDGTP HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCC ESVPMYPYEIATRLSDLGRLDFSAQPVPDATRDDFDPLERDRLRRIIGTYQSSDRNLLEL CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHC TDEELEKSLQADVMELLHVDANQAYYQLSKLVKGGKLGVIGRGKGARYTIGGFTGRK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA