| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691105
Identifier: 213691105
GI number: 213691105
Start: 218881
End: 220302
Strand: Direct
Name: 213691105
Synonym: Blon_0184
Alternate gene names: NA
Gene position: 218881-220302 (Clockwise)
Preceding gene: 213691104
Following gene: 213691107
Centisome position: 7.73
GC content: 47.89
Gene sequence:
>1422_bases TTGACTCCTGACGAATTGAAATCGAAAATCGTCCAAGGCGAAGGTGTCTCTCAGGAATTCAAGCGTTGCGGTTCGTTTCC GGAGTCGGATACTTTTGAGACAATATGTTCGTTCGCGAATCGGCAAGGTGGCAGTATTTTCCTAGGTGTCAGCGATGACG GAGAGATTCGCGGAGTTAATCGTCGAATCGTTCGTGATATCGAACGCAATATTGCAAATGTGACGTGCAATCCGAATGTA TTTGATCCAGCACCAGCGTTCGAGTCTGAGCGCATAGATATCGGTGAGGAATTGGTTCTTAGAATCTGGGTACCTGCGGG GCCGTCAGTCTACCGATACAAGAACGTGGTGTATGATCGCCGCGCCGACGCCGATATCCGTGTTCGTGATGATTCTCAGA TTTCGCTGATGTATTTGCGTAAGCAGAGCATCTACTCTGAGCGACGCATTTATCCATATGTAACAGTTGAGGATTTGCGC CAGGATCTGATTGAACGAACATACGATCTCATTCGTTTGCGAGACCCGAATCATCCTTGGCTCGCATTGGATTGCGACCA CATGCTTCGCGCGGCAAAATTATATAGCCGCGATCGGCAAACAGGCGAGCAGGGCTTAACTCTTGCTTCTGTATTATTGC TGGGAACTGATGAAGTTATTGGCGACGTATGTCCTGCATATAAGACTGATGCGCTAGTTCGCCGGCGCAATGTTGATCGA TATGATGACAGGTTGACGGTGTCCACCAATCTGCTTGATGCATACGATCAACTTACAGCCTTCGCCCATGCGCAAATGCC GGATACATTCATATTGGAGAATGACATTCGGGTAAGTGCGCGTAATATTATTTGCCGCGAATTGATTTCCAATCTGTTGA TTCATCGAGAATACACGAATCCATTCATCGCTCGTTTGGTAATTGACAATGACGGTATTCGTACTGAAAATGCCAGTCGT GCCTTGTTCGAGGGGCGCGTTACTCTGGACGACTTCAATCCTATGCCGAAAAATCCGATCATTGCGGGGTTCTTCACACA AATAGGTCGTGCGGATGATTTAGGCAGCGGAACACGGAATATATACCGATATTCTCGTTTGTATTCCGGCAAGGAGCCTG TGCTTGAAGATGGTGATGTGTTCAAGGCATTCGTTCCCGTTCCCAATGGAGCATCTGGGATTGGACACACTGAGAGTGTT CTTAGTCGCAGAGTTCAGGTAGACGTTGCGCAGAGTGTCGATACTGTCGATGAAACGATTGCAAGGCTATTGGCGGAGCA TGGAACAGTATCAAGTGCTGAGGTTGCTCAAGAGGCACAGGTCACTGTCCGTACTGCTTTGCGTCATTTGACCAAACTGA CACAATCCGGACTAATATGCGCAGAAGGAGAAAACCGTAACAGGAGATATCGATTAGCGTAG
Upstream 100 bases:
>100_bases GAGCCCTTGATCTGCTTGAAGCCAGATATGTTGGCATGTTATCGGACATGTCCGATAACATGTCCGATAACATGTCCGAT AATGCTGAAGGTGGCAAATA
Downstream 100 bases:
>100_bases GTGTTTTTGCAGTGAACATACGTTGATTGCGTGTGAAGCCTCGTGATATGGGCTGTCGAACGAAGTGAGACTGGGGGAGA GATTTCCGTACGTAATCTCT
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase RecG; Divergent AAA Domain Protein; ATPase; Divergent AAA ATPase; Divergent AAA Domain-Containing Protein; ATP-Dependent DNA Helicase
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNV FDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLR QDLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASR ALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESV LSRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA
Sequences:
>Translated_473_residues MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNV FDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLR QDLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASR ALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESV LSRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA >Mature_472_residues TPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNVF DPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQ DLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDRY DDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASRA LFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVL SRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53483; Mature: 53352
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVN CCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECHH RRIVRDIERNIANVTCNPNVFDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDR HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC RADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQDLIERTYDLIRLRDPNHPW CCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCCE LALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR EEECHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCH YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTN HCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC PFIARLVIDNDGIRTENASRALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRN CEEEEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEHHHHHCCCCCCCCCCHHH IYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVLSRRVQVDVAQSVDTVDETI HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECC >Mature Secondary Structure TPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVN CHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECHH RRIVRDIERNIANVTCNPNVFDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDR HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC RADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQDLIERTYDLIRLRDPNHPW CCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCCE LALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR EEECHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCH YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTN HCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC PFIARLVIDNDGIRTENASRALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRN CEEEEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEHHHHHCCCCCCCCCCHHH IYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVLSRRVQVDVAQSVDTVDETI HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA