| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is fhs [H]
Identifier: 213691102
GI number: 213691102
Start: 215787
End: 217304
Strand: Direct
Name: fhs [H]
Synonym: Blon_0181
Alternate gene names: 213691102
Gene position: 215787-217304 (Clockwise)
Preceding gene: 213691101
Following gene: 213691104
Centisome position: 7.62
GC content: 65.22
Gene sequence:
>1518_bases ATGACCACCATCGAAGACTTCACCAGCCAGTACGGCCTGGTCCAGAAGATCGACGCATTCGGCTACATGAAGTACCTGAC CGAGAACCCGGACGCCCCGTGCAAGCACGGCAAGGTGGTGCTCGTCACCGCCGATACGCCGCTCAAGGCATCGCGCGGCG AAGGCAAGACCACCACGACCATCGCCTTGATCGACGCCCTGAACAAGCGTGGCATTGATGCGGCCGCCGTGCTGCGTCAG CCGAGCATGGGCATCACCGCAGCCGGTTCCAAGGGCGGTGCCTCCGGCGGCGGCAAGGCATCCCTGACCCACCCCGAGCT CATCGACTGGGGTCTGTGCGGCGAAATGGGCGCCATCGAGGCGGCCCAGAACCTGCTCGTCTCCTTCGCCGAGAAGGCCA TCGATGAAGGCAAGCTTGACACGATTCTCGTGCCGCGTGTCTCCGAGGTGCCGAGCCGCTCCCTGCGCTCCACCGCCGTG GACTACGGCAAGGGCAACGTGCCGGAGAAGGTCGTGCTCACGCCGACCTGCGAGCTCATGCAGATCATGGTGCTCTCCCG CTCGATGGACGAGATTTCCGAGCGTGTATCCAAGATGATCGCCGGCACCAAGGACGGCAAGGCCGTGACCTTCGGCGAGT TCGTGGACCTGTGGCGCATCACCGGCATTCTGGCCGACGCGGTCAAGCCGGCCAAGACCGAGACCGTGAACGGCTCCCCG GTCTACGTGCACGGTGGCCCGTTCGCCAACGTGTCCATCGGCATTCCGACGCTGGTTTCCGTGGAAATGGCCTGCGCTCT GCATGATGTGGTTGTCGTCGAAGCCGGTTACGGCACCGACGCCGGTGCCCAGAAGTGGCTGGACATCGCCTGTCGCGAGT ATGGCGCGCAGTGGCCGTCCGCCGCCATCGTGGTGACCCGCGCCTCCACCTGGCGCGACGATCCCGAGCTGGCCTGGCGC TACCCGTTCCACGTGCAGCGCCTGGAGAACCTGGACATTCCGACCTTCCCGCTCATCAACCTGTGGGAAGGCGAGGACGA TCAGGTCCCGTCCCTGCAGGCCACCGCCGACGAGCTGGGCTTCCGCACGCCGATCGTCGGCAATCTGTTCCGCGACGGCG GCGAGGCGCTGGTCCCGCAGCTTGACGGTTTCGTCGATGCGTTGCAGAACGGCTCCATGCCGGCCGAACCGCATTCGCAC AAGGGCATGGCCCTGACCGAGAACGCCAAGTGGGTGGCCGAGAACGCCTACGGCGTACCGGCCGAGCGCGTGATCTACAA GCCGGGCTTCACCGAGTCTGTGTCCAAGGCCATGGAACTGTGCCAGAGCGCAGGCATCTCGCTGGACAATCTGACGTTCG TGGCGGTCAAGTCCCCGGCGACCATGACCGACAACGACCGTGCCCCCGAAGAAGAGCGCACCGTGACCCTGAAGAAGGTC GAGGTGCATGCCGGTGCCGGTCTGGTCCACGTCAACCTGACCACCAGCCTCACCACCCCTATGCCCAAGATTGTGTGA
Upstream 100 bases:
>100_bases CTAAGCTGTTAAGAAACAGCCCAGTGGGCTGTTTCTAGGCGAAGAGGCGGCGGCCGCCCCACCACCCCGCTCCGCCATCA TCAACACAGAAAGGCATTAA
Downstream 100 bases:
>100_bases TGACAGGCACGAGGTGAGGTAACTCGCTTTCGAGGGGCGGATTTCCGGTTTTCCGGAGGTCCATCTGCGTTTCGAGGGGC TCTTCGATTGCGAAACCCGG
Product: Formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTTIEDFTSQYGLVQKIDAFGYMKYLTENPDAPCKHGKVVLVTADTPLKASRGEGKTTTTIALIDALNKRGIDAAAVLRQ PSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIEAAQNLLVSFAEKAIDEGKLDTILVPRVSEVPSRSLRSTAV DYGKGNVPEKVVLTPTCELMQIMVLSRSMDEISERVSKMIAGTKDGKAVTFGEFVDLWRITGILADAVKPAKTETVNGSP VYVHGGPFANVSIGIPTLVSVEMACALHDVVVVEAGYGTDAGAQKWLDIACREYGAQWPSAAIVVTRASTWRDDPELAWR YPFHVQRLENLDIPTFPLINLWEGEDDQVPSLQATADELGFRTPIVGNLFRDGGEALVPQLDGFVDALQNGSMPAEPHSH KGMALTENAKWVAENAYGVPAERVIYKPGFTESVSKAMELCQSAGISLDNLTFVAVKSPATMTDNDRAPEEERTVTLKKV EVHAGAGLVHVNLTTSLTTPMPKIV
Sequences:
>Translated_505_residues MTTIEDFTSQYGLVQKIDAFGYMKYLTENPDAPCKHGKVVLVTADTPLKASRGEGKTTTTIALIDALNKRGIDAAAVLRQ PSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIEAAQNLLVSFAEKAIDEGKLDTILVPRVSEVPSRSLRSTAV DYGKGNVPEKVVLTPTCELMQIMVLSRSMDEISERVSKMIAGTKDGKAVTFGEFVDLWRITGILADAVKPAKTETVNGSP VYVHGGPFANVSIGIPTLVSVEMACALHDVVVVEAGYGTDAGAQKWLDIACREYGAQWPSAAIVVTRASTWRDDPELAWR YPFHVQRLENLDIPTFPLINLWEGEDDQVPSLQATADELGFRTPIVGNLFRDGGEALVPQLDGFVDALQNGSMPAEPHSH KGMALTENAKWVAENAYGVPAERVIYKPGFTESVSKAMELCQSAGISLDNLTFVAVKSPATMTDNDRAPEEERTVTLKKV EVHAGAGLVHVNLTTSLTTPMPKIV >Mature_504_residues TTIEDFTSQYGLVQKIDAFGYMKYLTENPDAPCKHGKVVLVTADTPLKASRGEGKTTTTIALIDALNKRGIDAAAVLRQP SMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIEAAQNLLVSFAEKAIDEGKLDTILVPRVSEVPSRSLRSTAVD YGKGNVPEKVVLTPTCELMQIMVLSRSMDEISERVSKMIAGTKDGKAVTFGEFVDLWRITGILADAVKPAKTETVNGSPV YVHGGPFANVSIGIPTLVSVEMACALHDVVVVEAGYGTDAGAQKWLDIACREYGAQWPSAAIVVTRASTWRDDPELAWRY PFHVQRLENLDIPTFPLINLWEGEDDQVPSLQATADELGFRTPIVGNLFRDGGEALVPQLDGFVDALQNGSMPAEPHSHK GMALTENAKWVAENAYGVPAERVIYKPGFTESVSKAMELCQSAGISLDNLTFVAVKSPATMTDNDRAPEEERTVTLKKVE VHAGAGLVHVNLTTSLTTPMPKIV
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=360, Percent_Identity=29.1666666666667, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI36796743, Length=336, Percent_Identity=30.6547619047619, Blast_Score=100, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17568737, Length=199, Percent_Identity=34.1708542713568, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17568739, Length=199, Percent_Identity=34.1708542713568, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319558, Length=458, Percent_Identity=27.5109170305677, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321643, Length=303, Percent_Identity=24.0924092409241, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24645718, Length=396, Percent_Identity=26.5151515151515, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI17137370, Length=396, Percent_Identity=26.5151515151515, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI62472483, Length=396, Percent_Identity=26.5151515151515, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45551871, Length=396, Percent_Identity=26.5151515151515, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 54079; Mature: 53948
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIEDFTSQYGLVQKIDAFGYMKYLTENPDAPCKHGKVVLVTADTPLKASRGEGKTTTT CCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE IALIDALNKRGIDAAAVLRQPSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIE EHEEHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AAQNLLVSFAEKAIDEGKLDTILVPRVSEVPSRSLRSTAVDYGKGNVPEKVVLTPTCELM HHHHHHHHHHHHHHCCCCCCEEECCCCHHCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH QIMVLSRSMDEISERVSKMIAGTKDGKAVTFGEFVDLWRITGILADAVKPAKTETVNGSP HHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VYVHGGPFANVSIGIPTLVSVEMACALHDVVVVEAGYGTDAGAQKWLDIACREYGAQWPS EEEECCCCCEEEECCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC AAIVVTRASTWRDDPELAWRYPFHVQRLENLDIPTFPLINLWEGEDDQVPSLQATADELG EEEEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHC FRTPIVGNLFRDGGEALVPQLDGFVDALQNGSMPAEPHSHKGMALTENAKWVAENAYGVP CCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCC AERVIYKPGFTESVSKAMELCQSAGISLDNLTFVAVKSPATMTDNDRAPEEERTVTLKKV HHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEEE EVHAGAGLVHVNLTTSLTTPMPKIV EEECCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure TTIEDFTSQYGLVQKIDAFGYMKYLTENPDAPCKHGKVVLVTADTPLKASRGEGKTTTT CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE IALIDALNKRGIDAAAVLRQPSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIE EHEEHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AAQNLLVSFAEKAIDEGKLDTILVPRVSEVPSRSLRSTAVDYGKGNVPEKVVLTPTCELM HHHHHHHHHHHHHHCCCCCCEEECCCCHHCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH QIMVLSRSMDEISERVSKMIAGTKDGKAVTFGEFVDLWRITGILADAVKPAKTETVNGSP HHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VYVHGGPFANVSIGIPTLVSVEMACALHDVVVVEAGYGTDAGAQKWLDIACREYGAQWPS EEEECCCCCEEEECCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC AAIVVTRASTWRDDPELAWRYPFHVQRLENLDIPTFPLINLWEGEDDQVPSLQATADELG EEEEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHC FRTPIVGNLFRDGGEALVPQLDGFVDALQNGSMPAEPHSHKGMALTENAKWVAENAYGVP CCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCC AERVIYKPGFTESVSKAMELCQSAGISLDNLTFVAVKSPATMTDNDRAPEEERTVTLKKV HHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEEE EVHAGAGLVHVNLTTSLTTPMPKIV EEECCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]