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The map label for this gene is recR [H]

Identifier: 213691082

GI number: 213691082

Start: 190317

End: 190919

Strand: Direct

Name: recR [H]

Synonym: Blon_0161

Alternate gene names: 213691082

Gene position: 190317-190919 (Clockwise)

Preceding gene: 213691081

Following gene: 213691084

Centisome position: 6.72

GC content: 62.35

Gene sequence:

>603_bases
ATGGCACTTGCTTATGACGGCGCAATACAGCGACTGATCGACGCTTTCGGGCGGCTGCCCGGCATCGGGCCGAAGGGCGC
GCAGCGTATCGCCTTCTACATGCTGTCCGCGCCCGAAGATGAAGCGCGCGATCTGGCCGAGGCCATCGAGGAGGTCAAGG
CCAAGATCCGCTTCTGTGATATTTGCGGCAACGTGTGCGAATCCAGCCCCTGCCCGGTATGCGCCGACCCGAGACGCGAC
CGTTCGGTGATCTGCGTGGTCGAAGAGCCCAAGGACGTGATGAGCATCGAGCGCACGCGCGAATACCGCGGCCTATACCA
TGTGCTCGGCGGCGCAATCAACCCAATGGCCAACGTTGGCCCTGCCGACCTGCGTATTCCCAGTCTGCTCAAACGCTTAG
AAGGCGATGAGGTCAAGGAAGTGATTATGGCGCTCGACCCGAATATTGAAGGCGAGGCCACCACCAGCTACTTGACCCAG
CTATTGCGACCCGTAGGTGTCAAGGTCACCCGACTTGCCAGCGGCCTGCCGGTGGGCTCCGACTTGGAGTACGCCGACGA
AATCACGCTAGGCAGGGCACTGGCCGGTCGGCGCGAGGCCTAG

Upstream 100 bases:

>100_bases
GTCGAGCAATTCGCGGCAGATGATCCGAAGAACCCCAAGAACATCCAGCCTGCCAAGAAGCACTCGGATGAATAATGAGG
ACGAATAACGAGGAATACCC

Downstream 100 bases:

>100_bases
GCCAGCGTATCATTGGCGCTCTCGCCCTTGCGGCGCATCCACGGCCAGAATGCGCCATGGCGGATGATGCACGCGGCCCT
TGTGTCGTCTGCCAACCAGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MALAYDGAIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCDICGNVCESSPCPVCADPRRD
RSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVGPADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQ
LLRPVGVKVTRLASGLPVGSDLEYADEITLGRALAGRREA

Sequences:

>Translated_200_residues
MALAYDGAIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCDICGNVCESSPCPVCADPRRD
RSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVGPADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQ
LLRPVGVKVTRLASGLPVGSDLEYADEITLGRALAGRREA
>Mature_199_residues
ALAYDGAIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCDICGNVCESSPCPVCADPRRDR
SVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVGPADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQL
LRPVGVKVTRLASGLPVGSDLEYADEITLGRALAGRREA

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=192, Percent_Identity=39.5833333333333, Blast_Score=153, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21741; Mature: 21610

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAYDGAIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCD
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVG
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVGS
CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC
DLEYADEITLGRALAGRREA
CCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALAYDGAIQRLIDAFGRLPGIGPKGAQRIAFYMLSAPEDEARDLAEAIEEVKAKIRFCD
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ICGNVCESSPCPVCADPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVG
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PADLRIPSLLKRLEGDEVKEVIMALDPNIEGEATTSYLTQLLRPVGVKVTRLASGLPVGS
CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC
DLEYADEITLGRALAGRREA
CCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA