| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691072
Identifier: 213691072
GI number: 213691072
Start: 180688
End: 181638
Strand: Direct
Name: 213691072
Synonym: Blon_0151
Alternate gene names: NA
Gene position: 180688-181638 (Clockwise)
Preceding gene: 213691071
Following gene: 213691073
Centisome position: 6.38
GC content: 59.73
Gene sequence:
>951_bases ATGAATAGCAATACCTCACCCCGCGTGGCGCGTAGGATCACCTCGCCAGCGGTAGCACCTCCGGGCATTCCGCTGCCCAC GGACGATGCGCCGATTCCAGCGCATCGCTACTACACTCCGCCGCCCAGGCCGTTGGCTTCATGCGAACGGCAGAGATCGG GCGAGGCTCCGGCACTCGCCCTAACTACAGACACCAGCTTTCATAACATTGTGACGATGACGTCAGGCCATGGAGGCGTG GGGTTGAGTGTCATGGCTTCCATGCTTGCATGGACATTGGCGAGACGTGAACACAGCTGCGTTCTCATAGACGCTGATTT CGTGGCCGGATGCCTTGATCTGCTACTTGGTGTAGAACGAGAGCCGGGCTTACGGTTCAGCCAAGTCGACGCGCCCCTCG GCCGTATCGAGGGTGAGGCGATGAACCATGAGCTGATGACGTGGGAGGGTGTGCGAGTACTTCCCTACGATCCTTGGAGC GCGCGCCAGCCTGACTGGTGGGAAGTTCAAGCGGCCATCCGGGCTTTGGCGGAAGCGAACGACGTCGTCATCGTGGACGC CGGGCAAGGGGGACTCATTGAGACCGTGCCCGATTTACGCAGTGGCATGCAGGTGATTGCCGCGGAATTGTCGGTAATGG GATTGGCTAGGGCCAAAGCGCACCGGTCCAGACTGGATTCTTGGGGCTGTGAAGCGCCACATATCGTCGGCGTGGAACCA CGTGGCGCTCCACGTGGGAGAGGGCACGTGGGTATTGGCGAGGCGCAGGACTACTTGACTGCCACGGTATTGGGTCCTGT CAAGCCAAGTGTCAATCTGTGCGGAGACGTACTGGAAGGCCTCGGCATCAGATCGGTGACCAAAGGCAGTCGCAAAGCCA TGAACTTGCTTGCCGATCTCGTAGAACAGGCCATTCGCTCGGTTTCGGGAACTTCTCACAAGGACCAGTGA
Upstream 100 bases:
>100_bases TGTCGTGGACGACATGCCGGGGTGTGGATAACTCGGCAAGCTAGAACCACAATGGTCGATTCGTGTTGAGCATTGAACTC GGACACGTTTCAATCGGCTT
Downstream 100 bases:
>100_bases TGCTATGGCTGCCGTAATCACTCGGGCTGATGAGCCCGGCGCAGTGCCCAGAACTGTGTTCTTCGGTCTATTGAATGATG TGGCATCCGACCCGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNSNTSPRVARRITSPAVAPPGIPLPTDDAPIPAHRYYTPPPRPLASCERQRSGEAPALALTTDTSFHNIVTMTSGHGGV GLSVMASMLAWTLARREHSCVLIDADFVAGCLDLLLGVEREPGLRFSQVDAPLGRIEGEAMNHELMTWEGVRVLPYDPWS ARQPDWWEVQAAIRALAEANDVVIVDAGQGGLIETVPDLRSGMQVIAAELSVMGLARAKAHRSRLDSWGCEAPHIVGVEP RGAPRGRGHVGIGEAQDYLTATVLGPVKPSVNLCGDVLEGLGIRSVTKGSRKAMNLLADLVEQAIRSVSGTSHKDQ
Sequences:
>Translated_316_residues MNSNTSPRVARRITSPAVAPPGIPLPTDDAPIPAHRYYTPPPRPLASCERQRSGEAPALALTTDTSFHNIVTMTSGHGGV GLSVMASMLAWTLARREHSCVLIDADFVAGCLDLLLGVEREPGLRFSQVDAPLGRIEGEAMNHELMTWEGVRVLPYDPWS ARQPDWWEVQAAIRALAEANDVVIVDAGQGGLIETVPDLRSGMQVIAAELSVMGLARAKAHRSRLDSWGCEAPHIVGVEP RGAPRGRGHVGIGEAQDYLTATVLGPVKPSVNLCGDVLEGLGIRSVTKGSRKAMNLLADLVEQAIRSVSGTSHKDQ >Mature_316_residues MNSNTSPRVARRITSPAVAPPGIPLPTDDAPIPAHRYYTPPPRPLASCERQRSGEAPALALTTDTSFHNIVTMTSGHGGV GLSVMASMLAWTLARREHSCVLIDADFVAGCLDLLLGVEREPGLRFSQVDAPLGRIEGEAMNHELMTWEGVRVLPYDPWS ARQPDWWEVQAAIRALAEANDVVIVDAGQGGLIETVPDLRSGMQVIAAELSVMGLARAKAHRSRLDSWGCEAPHIVGVEP RGAPRGRGHVGIGEAQDYLTATVLGPVKPSVNLCGDVLEGLGIRSVTKGSRKAMNLLADLVEQAIRSVSGTSHKDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33757; Mature: 33757
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNTSPRVARRITSPAVAPPGIPLPTDDAPIPAHRYYTPPPRPLASCERQRSGEAPALA CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE LTTDTSFHNIVTMTSGHGGVGLSVMASMLAWTLARREHSCVLIDADFVAGCLDLLLGVER EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCC EPGLRFSQVDAPLGRIEGEAMNHELMTWEGVRVLPYDPWSARQPDWWEVQAAIRALAEAN CCCCCHHHHCCCHHHCCCHHCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC DVVIVDAGQGGLIETVPDLRSGMQVIAAELSVMGLARAKAHRSRLDSWGCEAPHIVGVEP CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC RGAPRGRGHVGIGEAQDYLTATVLGPVKPSVNLCGDVLEGLGIRSVTKGSRKAMNLLADL CCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VEQAIRSVSGTSHKDQ HHHHHHHHCCCCCCCC >Mature Secondary Structure MNSNTSPRVARRITSPAVAPPGIPLPTDDAPIPAHRYYTPPPRPLASCERQRSGEAPALA CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE LTTDTSFHNIVTMTSGHGGVGLSVMASMLAWTLARREHSCVLIDADFVAGCLDLLLGVER EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCC EPGLRFSQVDAPLGRIEGEAMNHELMTWEGVRVLPYDPWSARQPDWWEVQAAIRALAEAN CCCCCHHHHCCCHHHCCCHHCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC DVVIVDAGQGGLIETVPDLRSGMQVIAAELSVMGLARAKAHRSRLDSWGCEAPHIVGVEP CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC RGAPRGRGHVGIGEAQDYLTATVLGPVKPSVNLCGDVLEGLGIRSVTKGSRKAMNLLADL CCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VEQAIRSVSGTSHKDQ HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA