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The map label for this gene is dedA [H]

Identifier: 213691071

GI number: 213691071

Start: 179741

End: 180466

Strand: Direct

Name: dedA [H]

Synonym: Blon_0150

Alternate gene names: 213691071

Gene position: 179741-180466 (Clockwise)

Preceding gene: 213691070

Following gene: 213691072

Centisome position: 6.35

GC content: 58.82

Gene sequence:

>726_bases
ATGGGCTTCGTTAATTTCATCCTCGAACTGCTGAAGGATCCGCGTGCCGCGATTGCCGGTTGGATTGCCATGGGCGTGGC
GCCGACCCTCGGATTCATCTTCCTCATCGTATTCATCGAAACGGGCGTGGTGTTCTTCCCGTTCCTGCCCGGTGATTCGC
TGTTGTTCGCGGCCGGCGTGTTCGCAGCCCCGGATGCTGCGACCGGCAAGGCCGCGCTGCCGTTGTTCTGGTTGCTGCCG
GTGGTTTGGTGCGCGCCGATTATCGGCGACCAGTGCAACTACTTCATCGGTCATTTCTTTGGCCGCCGTATCATCCAGTC
CGGCAAGGTGAAGGCCTTGACCCCGGAGCGTTTGGCCAAAACCGAGCACATGATTGAGAAGTGGGGCCCGCTGGCTGTGT
TCCTGGGCCGCTTCTTCCCGTTCATTCGTACGTTCATGCCGTTCATTTCCGGTATTTCCGGTATGCGTTGGAGCCGTTTC
ACGCCGTTCTCAGTGCTCGGTGGCCTGTGCTGGTCCACGCTGTTCACGTTGCTGGGCTACTTCTTCGGCAACATTCCGGC
CGTGCAGGATCACTTCGAGCTGGTGATCGTGCTGATTCTGCTGGTCTCGCTCGCCCCGACCATCATCGGTCTGTTCAAGG
CCAAGTTCGGCAAGAAGAAGCCGGCCAAGGTGACCGATGCTCAGCTGGACGTCATGGAAGACGGCATCAAGAACCTCGAT
AAGTGA

Upstream 100 bases:

>100_bases
ATCGGGGCGACTGGTAGAGTGGTTGACGGTTTTCAGACGAATGTCTGGTTATTGGACAGATTGTTCACACATATAGACGT
ATAGGACTCATAGGAATCAC

Downstream 100 bases:

>100_bases
TCAAGAAATGTAGATTACCGCATAAGGAATCGTCGTGAAAAATGAAGGCCCTGACCGTGCATATGAGGTCAGGGCCTTTT
GCATGAGATGGGCGTGAAAC

Product: DedA integral membrane protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MGFVNFILELLKDPRAAIAGWIAMGVAPTLGFIFLIVFIETGVVFFPFLPGDSLLFAAGVFAAPDAATGKAALPLFWLLP
VVWCAPIIGDQCNYFIGHFFGRRIIQSGKVKALTPERLAKTEHMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRF
TPFSVLGGLCWSTLFTLLGYFFGNIPAVQDHFELVIVLILLVSLAPTIIGLFKAKFGKKKPAKVTDAQLDVMEDGIKNLD
K

Sequences:

>Translated_241_residues
MGFVNFILELLKDPRAAIAGWIAMGVAPTLGFIFLIVFIETGVVFFPFLPGDSLLFAAGVFAAPDAATGKAALPLFWLLP
VVWCAPIIGDQCNYFIGHFFGRRIIQSGKVKALTPERLAKTEHMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRF
TPFSVLGGLCWSTLFTLLGYFFGNIPAVQDHFELVIVLILLVSLAPTIIGLFKAKFGKKKPAKVTDAQLDVMEDGIKNLD
K
>Mature_240_residues
GFVNFILELLKDPRAAIAGWIAMGVAPTLGFIFLIVFIETGVVFFPFLPGDSLLFAAGVFAAPDAATGKAALPLFWLLPV
VWCAPIIGDQCNYFIGHFFGRRIIQSGKVKALTPERLAKTEHMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRFT
PFSVLGGLCWSTLFTLLGYFFGNIPAVQDHFELVIVLILLVSLAPTIIGLFKAKFGKKKPAKVTDAQLDVMEDGIKNLDK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=213, Percent_Identity=37.5586854460094, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1789481, Length=194, Percent_Identity=31.9587628865979, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1789384, Length=170, Percent_Identity=30.5882352941176, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26625; Mature: 26494

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
GFVNFILELLKDPRAAIAGWIAMGVAPTLGFIFLIVFIETGVVFFPFLPGDSLLFAAGV
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHH
FAAPDAATGKAALPLFWLLPVVWCAPIIGDQCNYFIGHFFGRRIIQSGKVKALTPERLAK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
TEHMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRFTPFSVLGGLCWSTLFTLLGY
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FFGNIPAVQDHFELVIVLILLVSLAPTIIGLFKAKFGKKKPAKVTDAQLDVMEDGIKNLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]