| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yhjE [H]
Identifier: 213691051
GI number: 213691051
Start: 153976
End: 155343
Strand: Direct
Name: yhjE [H]
Synonym: Blon_0130
Alternate gene names: 213691051
Gene position: 153976-155343 (Clockwise)
Preceding gene: 213691050
Following gene: 213691052
Centisome position: 5.44
GC content: 63.38
Gene sequence:
>1368_bases ATGACTGCAGCAGTCGAAGAGACTGGCTTAGGGCAGGCGGCAGGTAAAGCCGCTACCTTGGTACGCGATTCGGTCAAGAC CGTGATCGCCGCATCGATGGTCGGTACCGCCATCGAATTCTATGACTTCTACGCCTACGGCACCGCCGCGGCAAACTACT TCCCGCACATCTTCTTCTCCGCGAAGGACAACCCCACCGTCGCACTGCTGATGAGCTTGCTGACCTTCGCCATCGCCTTC ATCGCCCGCCCGCTGGGCTCGCTGATCTTCGGCCACTTCGGCGATCGCATGGGCCGCAAGACCACGCTGGTCGTGAGCCT CATGACCATGGGTGTCGGCACCTTCCTGATTGGCTGCCTGCCCACCTACGATCAGGTCGGCGTTGGTGCAGTCGCCATCC TCTGCCTCCTGCGCTTCATCCAGGGCATCGGCCTGGGCGGCGAATGGTCCGGCGCGGCACTGGTCGCCACCGAGAACGCG CCTGAAGACAAGCGCGCACTGTACGGCTCCTTCCCGGAGCTGGGCGCGCCGATCGGCTTCTTCCTGTCCAACGGCACCTA CTTCGTGCTCGAATCCTTCAACAATCAGGACGCGATGCTGGCTTGGGGCTGGCGTGTGCCGTTCCTGCTGTCCGCCATCC TGGTGATCGTCGGCCTCGTGGTTCGCGTTCACATGGAGGAGACCCCGATCTTCCGTATGGCTCAGGAGCAGAAGAAGGTC GTCAAGTCCCCGCTGACCGAGGTCTTCCGCAAGTCCTGGCGTCAGGTGCTGCAGGCCACCTTCCTCGTGGCCGTGACCTA CACGCTGTTCTACACGCTCGCCACCTGGTCCCTCGCTTGGGGCACCAAGGAGCAGGGCGAAGGCGGCGGCGGCCTTGGCT TCACCAACCAGGAATACCTGCTCATGCTCATGATCTCCATCTGCGTGTTCGCCCTGTTCATCGTGCTGTCCTGCCTGTAC GCGGACAAGATCGGCCGCAAGCGCGTGCTGACCTTCTCCTCCTGCGCACTCGTCGTGTTCGCCGTGCTCTTCCCGTTCCT GCTGGACGGTGGTCTGGTCGGGCAGAAGAACTTCCTCGCCAACATGGTGTTCCTGTGCGTTGGCTTTGCCCTGATGGGCG TCGCCTTCGGCCCGATCGGCGCGTTCCTGCCTGAACTGTTCGAGGCGAACGTGCGCTACTCCGGCTCCGGCATCGGCTAC AATCTGGCCGCCATCGTCGGCGCGGCGTTCGTGCCGACCATCGCCACTTGGCTGAGCTCCCACTGGGGCGTCCACTCCGT GGGCCTCTACCTCGCCGTGATGGCCGTGTGCTGCCTGGTGTCGGTCCTGACCTGCCGTGAGACGAAGGACGCTGACTTTA CCAAGTGA
Upstream 100 bases:
>100_bases AACGGTAGCGGACAGTACACGGCAACAGAACAACAACCTCCCTGTGAGACGAAATAATCGCCCGCCAATGAGAGTGAACG AGAGCAAAACAGGAGTAACA
Downstream 100 bases:
>100_bases AATCCTCCATAACTAAATATCGCCAAGTTCACAACGTGAAAAATCTCAATTCCACTAAGTGAACCTCTGCAGGGCTTTTC CGGGTCAACAGGACTAAACC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTAAVEETGLGQAAGKAATLVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFSAKDNPTVALLMSLLTFAIAF IARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCLPTYDQVGVGAVAILCLLRFIQGIGLGGEWSGAALVATENA PEDKRALYGSFPELGAPIGFFLSNGTYFVLESFNNQDAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKV VKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKEQGEGGGGLGFTNQEYLLMLMISICVFALFIVLSCLY ADKIGRKRVLTFSSCALVVFAVLFPFLLDGGLVGQKNFLANMVFLCVGFALMGVAFGPIGAFLPELFEANVRYSGSGIGY NLAAIVGAAFVPTIATWLSSHWGVHSVGLYLAVMAVCCLVSVLTCRETKDADFTK
Sequences:
>Translated_455_residues MTAAVEETGLGQAAGKAATLVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFSAKDNPTVALLMSLLTFAIAF IARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCLPTYDQVGVGAVAILCLLRFIQGIGLGGEWSGAALVATENA PEDKRALYGSFPELGAPIGFFLSNGTYFVLESFNNQDAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKV VKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKEQGEGGGGLGFTNQEYLLMLMISICVFALFIVLSCLY ADKIGRKRVLTFSSCALVVFAVLFPFLLDGGLVGQKNFLANMVFLCVGFALMGVAFGPIGAFLPELFEANVRYSGSGIGY NLAAIVGAAFVPTIATWLSSHWGVHSVGLYLAVMAVCCLVSVLTCRETKDADFTK >Mature_454_residues TAAVEETGLGQAAGKAATLVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFSAKDNPTVALLMSLLTFAIAFI ARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCLPTYDQVGVGAVAILCLLRFIQGIGLGGEWSGAALVATENAP EDKRALYGSFPELGAPIGFFLSNGTYFVLESFNNQDAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKVV KSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKEQGEGGGGLGFTNQEYLLMLMISICVFALFIVLSCLYA DKIGRKRVLTFSSCALVVFAVLFPFLLDGGLVGQKNFLANMVFLCVGFALMGVAFGPIGAFLPELFEANVRYSGSGIGYN LAAIVGAAFVPTIATWLSSHWGVHSVGLYLAVMAVCCLVSVLTCRETKDADFTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=428, Percent_Identity=50, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI1788292, Length=446, Percent_Identity=33.1838565022422, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI1790550, Length=447, Percent_Identity=29.9776286353468, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1788942, Length=438, Percent_Identity=29.4520547945205, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI87082404, Length=396, Percent_Identity=26.5151515151515, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI87082231, Length=176, Percent_Identity=25.5681818181818, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49081; Mature: 48950
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAVEETGLGQAAGKAATLVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AKDNPTVALLMSLLTFAIAFIARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PTYDQVGVGAVAILCLLRFIQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGF CCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHCCCHHH FLSNGTYFVLESFNNQDAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKV EECCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKEQGEGGGGLGFTNQEYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH LMLMISICVFALFIVLSCLYADKIGRKRVLTFSSCALVVFAVLFPFLLDGGLVGQKNFLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NMVFLCVGFALMGVAFGPIGAFLPELFEANVRYSGSGIGYNLAAIVGAAFVPTIATWLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HWGVHSVGLYLAVMAVCCLVSVLTCRETKDADFTK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TAAVEETGLGQAAGKAATLVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AKDNPTVALLMSLLTFAIAFIARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PTYDQVGVGAVAILCLLRFIQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGF CCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHCCCHHH FLSNGTYFVLESFNNQDAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKV EECCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKEQGEGGGGLGFTNQEYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH LMLMISICVFALFIVLSCLYADKIGRKRVLTFSSCALVVFAVLFPFLLDGGLVGQKNFLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NMVFLCVGFALMGVAFGPIGAFLPELFEANVRYSGSGIGYNLAAIVGAAFVPTIATWLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HWGVHSVGLYLAVMAVCCLVSVLTCRETKDADFTK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]