Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is nixA [H]

Identifier: 213691030

GI number: 213691030

Start: 130068

End: 131042

Strand: Direct

Name: nixA [H]

Synonym: Blon_0109

Alternate gene names: 213691030

Gene position: 130068-131042 (Clockwise)

Preceding gene: 213691029

Following gene: 213691031

Centisome position: 4.59

GC content: 58.97

Gene sequence:

>975_bases
ATGGGAACGGCGATGCTGCATATTCTGGGCATCGGCATGCTGCTCATGGCGGCCGGAACGGCTCCCGTGCTGTTTGGGCT
GGGAATGCTCGCCTACACGTTGGGTTTGCGCCACGCGTTCGATGCGGATCACATCGCGGCGATCGACAATACCGTGCGCA
AGCTTATCCAGCTGAAACGGAACCCGAACGGCGTCGGATTCTTCTTCTCTCTGGGCCATTCGACCATCGTGTTCCTCATG
GCGCTGCTTCTGGGATTGTCGTCCAAGTGGGCTCAGGCGCATATGGCCGTGTTCCAGCAGATCGGCGGATACGTCGGCGC
CACGGTCTCCGGGATGTTCCTGATCCTCACCGCGGTGTTCAACGCGGTCGTGCTTGTGGACATGGTCCGGGTCTTCCGCT
CCATGAAAGGCCATCGCAAGGATTACGACGACAACGCGTTCAGCGCGATGCTCGACTCGCGAGGTTTCATCAACAGAATC
TTCGGCAGGCTGTTCGCCTTCGTGACCAGAAGCTGGCATGTGTATCCGATAGGACTGCTCTTCGGACTCGGATTCGACAC
CGCCACCGAAGTCGCGTTGCTGGCCATGTCGGCCGGCGCCACGCAGTCGAACATCCCGCTGTACGGCACGCTTTGCCTTC
CGATACTGTTCGCTGCGGGCATGAATCTCATGGACACCACGGATTCGGTGATGATGTCCAGCGCATACGAGTGGGCTTTC
GACACGCCGGTGCGCAAGGTCTACTACAACCTGACCATCACCTCCGCTTCGGTGCTTGCCGCGGTGATGATCGGCGTGGT
CGAACTGTTGCAGGTCATCGCCACGGCCATGAATCTTCGGAGCGGATTCTGGAACTGGGTGCAGGGAATCGACTTCAATT
ACCTCGGTTATGCGATGGTCGTGCTGTTCATCGGTTTCTGGCTCGTCTCGGTGCTGATCTGGAAATACGGCAAGGTCGAG
CAGCATTGGGCGTGA

Upstream 100 bases:

>100_bases
CGGGTCGGCGCGCGGTGCCCGATCCAGGTTCCCGTGACCTGCAAGGAGAGTGTCAGTGAAAGGTCTGCGACGAATCGTGA
AGGCGGGATTGCCGTACTAT

Downstream 100 bases:

>100_bases
CCATCGCCGCCACGCGATCCGCGGCATCATCGGCGTGCGGGCGAGGAGAATCCTCTCGCGCACGCGCAACGGCAACACTG
TGAGGCAATCAACGACAAGG

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLM
ALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRI
FGRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF
DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVE
QHWA

Sequences:

>Translated_324_residues
MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLM
ALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRI
FGRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF
DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVE
QHWA
>Mature_323_residues
GTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLMA
LLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRIF
GRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAFD
TPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVEQ
HWA

Specific function: High-affinity nickel intake protein. Imports nickel ions in an energy-dependent fashion. Necessary for the expression of catalytically active urease [H]

COG id: COG3376

COG function: function code P; High-affinity nickel permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004688
- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 35621; Mature: 35489

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
NPNGVGFFFSLGHSTIVFLMALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVF
CCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRIFGRLFAFVTRSWHVYPIGLL
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHH
FGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF
HHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH
DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMV
CCCHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VLFIGFWLVSVLIWKYGKVEQHWA
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC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HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]