| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is nixA [H]
Identifier: 213691030
GI number: 213691030
Start: 130068
End: 131042
Strand: Direct
Name: nixA [H]
Synonym: Blon_0109
Alternate gene names: 213691030
Gene position: 130068-131042 (Clockwise)
Preceding gene: 213691029
Following gene: 213691031
Centisome position: 4.59
GC content: 58.97
Gene sequence:
>975_bases ATGGGAACGGCGATGCTGCATATTCTGGGCATCGGCATGCTGCTCATGGCGGCCGGAACGGCTCCCGTGCTGTTTGGGCT GGGAATGCTCGCCTACACGTTGGGTTTGCGCCACGCGTTCGATGCGGATCACATCGCGGCGATCGACAATACCGTGCGCA AGCTTATCCAGCTGAAACGGAACCCGAACGGCGTCGGATTCTTCTTCTCTCTGGGCCATTCGACCATCGTGTTCCTCATG GCGCTGCTTCTGGGATTGTCGTCCAAGTGGGCTCAGGCGCATATGGCCGTGTTCCAGCAGATCGGCGGATACGTCGGCGC CACGGTCTCCGGGATGTTCCTGATCCTCACCGCGGTGTTCAACGCGGTCGTGCTTGTGGACATGGTCCGGGTCTTCCGCT CCATGAAAGGCCATCGCAAGGATTACGACGACAACGCGTTCAGCGCGATGCTCGACTCGCGAGGTTTCATCAACAGAATC TTCGGCAGGCTGTTCGCCTTCGTGACCAGAAGCTGGCATGTGTATCCGATAGGACTGCTCTTCGGACTCGGATTCGACAC CGCCACCGAAGTCGCGTTGCTGGCCATGTCGGCCGGCGCCACGCAGTCGAACATCCCGCTGTACGGCACGCTTTGCCTTC CGATACTGTTCGCTGCGGGCATGAATCTCATGGACACCACGGATTCGGTGATGATGTCCAGCGCATACGAGTGGGCTTTC GACACGCCGGTGCGCAAGGTCTACTACAACCTGACCATCACCTCCGCTTCGGTGCTTGCCGCGGTGATGATCGGCGTGGT CGAACTGTTGCAGGTCATCGCCACGGCCATGAATCTTCGGAGCGGATTCTGGAACTGGGTGCAGGGAATCGACTTCAATT ACCTCGGTTATGCGATGGTCGTGCTGTTCATCGGTTTCTGGCTCGTCTCGGTGCTGATCTGGAAATACGGCAAGGTCGAG CAGCATTGGGCGTGA
Upstream 100 bases:
>100_bases CGGGTCGGCGCGCGGTGCCCGATCCAGGTTCCCGTGACCTGCAAGGAGAGTGTCAGTGAAAGGTCTGCGACGAATCGTGA AGGCGGGATTGCCGTACTAT
Downstream 100 bases:
>100_bases CCATCGCCGCCACGCGATCCGCGGCATCATCGGCGTGCGGGCGAGGAGAATCCTCTCGCGCACGCGCAACGGCAACACTG TGAGGCAATCAACGACAAGG
Product: high-affinity nickel-transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLM ALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRI FGRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVE QHWA
Sequences:
>Translated_324_residues MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLM ALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRI FGRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVE QHWA >Mature_323_residues GTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKRNPNGVGFFFSLGHSTIVFLMA LLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVFNAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRIF GRLFAFVTRSWHVYPIGLLFGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAFD TPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMVVLFIGFWLVSVLIWKYGKVEQ HWA
Specific function: High-affinity nickel intake protein. Imports nickel ions in an energy-dependent fashion. Necessary for the expression of catalytically active urease [H]
COG id: COG3376
COG function: function code P; High-affinity nickel permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004688 - InterPro: IPR011541 [H]
Pfam domain/function: PF03824 NicO [H]
EC number: NA
Molecular weight: Translated: 35621; Mature: 35489
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKR CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC NPNGVGFFFSLGHSTIVFLMALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVF CCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRIFGRLFAFVTRSWHVYPIGLL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHH FGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF HHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMV CCCHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLFIGFWLVSVLIWKYGKVEQHWA HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GTAMLHILGIGMLLMAAGTAPVLFGLGMLAYTLGLRHAFDADHIAAIDNTVRKLIQLKR CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC NPNGVGFFFSLGHSTIVFLMALLLGLSSKWAQAHMAVFQQIGGYVGATVSGMFLILTAVF CCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NAVVLVDMVRVFRSMKGHRKDYDDNAFSAMLDSRGFINRIFGRLFAFVTRSWHVYPIGLL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHH FGLGFDTATEVALLAMSAGATQSNIPLYGTLCLPILFAAGMNLMDTTDSVMMSSAYEWAF HHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH DTPVRKVYYNLTITSASVLAAVMIGVVELLQVIATAMNLRSGFWNWVQGIDFNYLGYAMV CCCHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLFIGFWLVSVLIWKYGKVEQHWA HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]