| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213690979
Identifier: 213690979
GI number: 213690979
Start: 65081
End: 65614
Strand: Direct
Name: 213690979
Synonym: Blon_0057
Alternate gene names: NA
Gene position: 65081-65614 (Clockwise)
Preceding gene: 213690978
Following gene: 213690982
Centisome position: 2.3
GC content: 52.43
Gene sequence:
>534_bases GTGGATCGGGTTCACAACGAGTGGGAGGCGGTGCCGGTCCTAGGTCTCGGTGATCTGGGCGGATGGGCTCTGGATTTGTT GCAGATCTGGGGAAGCTACCTGGCGAATACCCCGAAAGAGGACCTGGCGTCATGGCTGCACACTCATCTCGGCGAGCAAG ACGCCCGTATGGGATTCAGTTACAGCGATGTTCTCGCGGACTGTGATGCATGGTTGTTGGCGCGGTCCATGCAGAGCAAT TCCTCCGAAAGGTCTTTGTCCACCGCTATGCGGGACATGTTCGCGCAAAGCGAGACGAATCGAATTAAACGGTTCTATCA GTCCCGGTTCAAGGGAAGTGCGGACAACCTGGTCATCGCATTTCGAAAGCTCGTTGATGGAATCGATCTTGGAATATTCG ATAACGTATCCGGAAGTAAAAAAGCACTGCTCATTGCGTCACATGCAGACCGACTCCCGAGTCAAGCGGAGGCTGGTATA TTGGCATTATCCTATGCTGAATCTCTTGAAAATCGAACCGTTAATCAATCATGA
Upstream 100 bases:
>100_bases TGAAGGACAGGTGCCGGAGTTACGCAAGGTCAATGAGCATCATTGGGTGGCTTGGAGCTGATACCTGCAGGATTATGCAT TGCGTCTTTCCTCTGTTGGA
Downstream 100 bases:
>100_bases TTGTGATCGCATTGCGTGGAATGATTCAGCCATTCCACGCAATGCGCCTCTGGTAAAACGTCATAGAGTCATTAGAGCGG AAAGTAGCGTTATCACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDRVHNEWEAVPVLGLGDLGGWALDLLQIWGSYLANTPKEDLASWLHTHLGEQDARMGFSYSDVLADCDAWLLARSMQSN SSERSLSTAMRDMFAQSETNRIKRFYQSRFKGSADNLVIAFRKLVDGIDLGIFDNVSGSKKALLIASHADRLPSQAEAGI LALSYAESLENRTVNQS
Sequences:
>Translated_177_residues MDRVHNEWEAVPVLGLGDLGGWALDLLQIWGSYLANTPKEDLASWLHTHLGEQDARMGFSYSDVLADCDAWLLARSMQSN SSERSLSTAMRDMFAQSETNRIKRFYQSRFKGSADNLVIAFRKLVDGIDLGIFDNVSGSKKALLIASHADRLPSQAEAGI LALSYAESLENRTVNQS >Mature_177_residues MDRVHNEWEAVPVLGLGDLGGWALDLLQIWGSYLANTPKEDLASWLHTHLGEQDARMGFSYSDVLADCDAWLLARSMQSN SSERSLSTAMRDMFAQSETNRIKRFYQSRFKGSADNLVIAFRKLVDGIDLGIFDNVSGSKKALLIASHADRLPSQAEAGI LALSYAESLENRTVNQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19624; Mature: 19624
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRVHNEWEAVPVLGLGDLGGWALDLLQIWGSYLANTPKEDLASWLHTHLGEQDARMGFS CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC YSDVLADCDAWLLARSMQSNSSERSLSTAMRDMFAQSETNRIKRFYQSRFKGSADNLVIA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FRKLVDGIDLGIFDNVSGSKKALLIASHADRLPSQAEAGILALSYAESLENRTVNQS HHHHHHHCCCCCCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDRVHNEWEAVPVLGLGDLGGWALDLLQIWGSYLANTPKEDLASWLHTHLGEQDARMGFS CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC YSDVLADCDAWLLARSMQSNSSERSLSTAMRDMFAQSETNRIKRFYQSRFKGSADNLVIA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FRKLVDGIDLGIFDNVSGSKKALLIASHADRLPSQAEAGILALSYAESLENRTVNQS HHHHHHHCCCCCCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA