| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213690970
Identifier: 213690970
GI number: 213690970
Start: 51637
End: 52818
Strand: Direct
Name: 213690970
Synonym: Blon_0046
Alternate gene names: NA
Gene position: 51637-52818 (Clockwise)
Preceding gene: 213690969
Following gene: 213690973
Centisome position: 1.82
GC content: 59.31
Gene sequence:
>1182_bases ATGACTCAACATAACGATTGGAGCGCTATGCAGCAAAGTTCGTATCATGATATGCAGGTCGATTCGTCGGGTGCGTTCGC CGCGCGCAGTCCGATGGACTCGCTTGCGGTTGCGGTACCAGGGCGCACGCGTTGTGTGAACGCCGAGAATCCCACGGGCG GCAAGGGCACTGCGGCCAGTGCGGCCAGTGCACTTGGCCCGTCGCGCAAAGGCAGCCCCTGCATCCAAACCGTGAAAGCG GGGGAGAACGTCACTTTGATGGATGTGGACGGTCCGGGCGTGATCCGCCATATTTGGATGACCGTCACTGACCGCACGTC GCCTACCGGTCCGAACGTGCTTCGTGACCTGATCTTGGAATTCTATTGGGATGGCGAGAAAACCCCGTCCGCGCAATGCC CGATCGGCGACTTCTTCTGCTGCGGCCACGCGCAGGCCTGCCGAGTCAATTCGGTGCCGGTGGTGGTCGTACCCAATCGC GGCTTCAACTGCTATTTCTCCATGCCGTTCGAACATGCGCGCATTGTGCTCCGCAACGATCATAATGAAGACGTTCCCGC GTTCTTCTACCAGATCGACTACACCGAATATGACTCGCTTCCGGCCGGCACCATGCGCTTTCATGCGCAGTGGCGTCGCG AGCGCGTCACCGAACCGGCCCGCGATTATGTGGTGCTTGACGGCGTGCACGGTCGTGGCGCGTATATCGGCACGTATCTG GCGCTCACCGCGTTAGAAAGCCGATGGTGGGGCGAGGGCGAAGTCAAGATGTACATCGATGGAGACGATCAGTACCCTAC ATGGTGTAGCACCGGTGCCGAGGATTATTTCGGTGGCGCGTGGAGTTTCGCTGATTTTGACGAGCGTGGGCGCATGCATG AGCAGACATTCTGTGCGCCGTACGTCGGATTCCCGTTCTACTCGCAGCGTCTCGCCTCGCATCGCGAGAGCGCGTATTGG GATGTGAATACCCCTGTGACCCGCGGACTATATCGCTGGCACATTCCCGATCCGATTTATTTCGAGCATGATTTGCGCGT GGAATGGCAGCAGATCGGCACTGAAGAGGGTGGCAATTTCGAACGTCAGGACGACGTCGCTTCCGTCGCGTACTGGTATC AGCTCGAGCCGCACACGCCGTTCGATCCGATTGGAGATCGTCATTTCCGCCAGCCCCGCTGA
Upstream 100 bases:
>100_bases CTCAGCATTGTGCCGACCATTATCTTCTTCATTATTTTCCAGCGCAAGTTGTCGCAAGGCATCACCGCCGGTGCCGTAAA GTAGCAGAAAAGGGGCGCCG
Downstream 100 bases:
>100_bases TTTTCACCCCCGAACCTGTGATTTCCGGTCTATCCGGTCGGTCCGGGGGTGTTGTGCTGTCTGCACGACTTGCGTTCTGT GTCTGCACGACTTGCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTQHNDWSAMQQSSYHDMQVDSSGAFAARSPMDSLAVAVPGRTRCVNAENPTGGKGTAASAASALGPSRKGSPCIQTVKA GENVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRDLILEFYWDGEKTPSAQCPIGDFFCCGHAQACRVNSVPVVVVPNR GFNCYFSMPFEHARIVLRNDHNEDVPAFFYQIDYTEYDSLPAGTMRFHAQWRRERVTEPARDYVVLDGVHGRGAYIGTYL ALTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDERGRMHEQTFCAPYVGFPFYSQRLASHRESAYW DVNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNFERQDDVASVAYWYQLEPHTPFDPIGDRHFRQPR
Sequences:
>Translated_393_residues MTQHNDWSAMQQSSYHDMQVDSSGAFAARSPMDSLAVAVPGRTRCVNAENPTGGKGTAASAASALGPSRKGSPCIQTVKA GENVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRDLILEFYWDGEKTPSAQCPIGDFFCCGHAQACRVNSVPVVVVPNR GFNCYFSMPFEHARIVLRNDHNEDVPAFFYQIDYTEYDSLPAGTMRFHAQWRRERVTEPARDYVVLDGVHGRGAYIGTYL ALTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDERGRMHEQTFCAPYVGFPFYSQRLASHRESAYW DVNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNFERQDDVASVAYWYQLEPHTPFDPIGDRHFRQPR >Mature_392_residues TQHNDWSAMQQSSYHDMQVDSSGAFAARSPMDSLAVAVPGRTRCVNAENPTGGKGTAASAASALGPSRKGSPCIQTVKAG ENVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRDLILEFYWDGEKTPSAQCPIGDFFCCGHAQACRVNSVPVVVVPNRG FNCYFSMPFEHARIVLRNDHNEDVPAFFYQIDYTEYDSLPAGTMRFHAQWRRERVTEPARDYVVLDGVHGRGAYIGTYLA LTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDERGRMHEQTFCAPYVGFPFYSQRLASHRESAYWD VNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNFERQDDVASVAYWYQLEPHTPFDPIGDRHFRQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44520; Mature: 44389
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHNDWSAMQQSSYHDMQVDSSGAFAARSPMDSLAVAVPGRTRCVNAENPTGGKGTAAS CCCCCCHHHHHHCCCCCEEECCCCCEEECCCCCCEEEECCCCEEEECCCCCCCCCCCHHH AASALGPSRKGSPCIQTVKAGENVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRDLILE HHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH FYWDGEKTPSAQCPIGDFFCCGHAQACRVNSVPVVVVPNRGFNCYFSMPFEHARIVLRND HHCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEECCCCCEEEEECCCCCEEEEEECC HNEDVPAFFYQIDYTEYDSLPAGTMRFHAQWRRERVTEPARDYVVLDGVHGRGAYIGTYL CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH ALTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDERGRMHEQTFCAP HHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCHHCCCCCCCCCHHHCCCCCHHHCCCC YVGFPFYSQRLASHRESAYWDVNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNF CCCCCHHHHHHHHHCCCCEEECCCCHHCCEEEEECCCCEEEECCCEEEHHHCCCCCCCCC ERQDDVASVAYWYQLEPHTPFDPIGDRHFRQPR CCHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQHNDWSAMQQSSYHDMQVDSSGAFAARSPMDSLAVAVPGRTRCVNAENPTGGKGTAAS CCCCCHHHHHHCCCCCEEECCCCCEEECCCCCCEEEECCCCEEEECCCCCCCCCCCHHH AASALGPSRKGSPCIQTVKAGENVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRDLILE HHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH FYWDGEKTPSAQCPIGDFFCCGHAQACRVNSVPVVVVPNRGFNCYFSMPFEHARIVLRND HHCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEEEECCCCCEEEEECCCCCEEEEEECC HNEDVPAFFYQIDYTEYDSLPAGTMRFHAQWRRERVTEPARDYVVLDGVHGRGAYIGTYL CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH ALTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDERGRMHEQTFCAP HHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCHHCCCCCCCCCHHHCCCCCHHHCCCC YVGFPFYSQRLASHRESAYWDVNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNF CCCCCHHHHHHHHHCCCCEEECCCCHHCCEEEEECCCCEEEECCCEEEHHHCCCCCCCCC ERQDDVASVAYWYQLEPHTPFDPIGDRHFRQPR CCHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA