| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213690942
Identifier: 213690942
GI number: 213690942
Start: 16948
End: 17208
Strand: Reverse
Name: 213690942
Synonym: Blon_0016
Alternate gene names: NA
Gene position: 17208-16948 (Counterclockwise)
Preceding gene: 213690944
Following gene: 213690941
Centisome position: 0.61
GC content: 64.37
Gene sequence:
>261_bases GTGAAAGAAAAAGTGAAGGATACCGTGCGGCTTGGCATTGAGTTTAGCACGTTCGACGGATGGGTGTTGCTCGGCCTGGA CGGATTGGGGTTGCGTCCCCTGGTGCAACGGCACCTGGCCATGGGCACTCGCGGGGGCGTGTGGCAGATACGCTGCGAGC CGGAGGGGCCCGCCGCACGGTGTTGCGCCCAGTGCGACGGTGTCGAGGAGATCGGCGTGGACGAGCACGTGTGGCGACAC ACCCCGTTCGGCAGTAGGTAA
Upstream 100 bases:
>100_bases GGTATTTCCTTACTTTTTTCATTTGATTCTTCCTTGAATCGTTGATTTACCCGGCTCTTCCGATTTTGGTGTGTAAGGGC CGTGCGGTTTCATTCGTTGT
Downstream 100 bases:
>100_bases GTGACCATCATCGTGGACCTGACGCCCAGGAAGAAAGGCGGGACGGCCCGCCTGCTGGACATGGTCGAAGGCAGGAGCGA GAAGGCGTTCACCACATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKEKVKDTVRLGIEFSTFDGWVLLGLDGLGLRPLVQRHLAMGTRGGVWQIRCEPEGPAARCCAQCDGVEEIGVDEHVWRH TPFGSR
Sequences:
>Translated_86_residues MKEKVKDTVRLGIEFSTFDGWVLLGLDGLGLRPLVQRHLAMGTRGGVWQIRCEPEGPAARCCAQCDGVEEIGVDEHVWRH TPFGSR >Mature_86_residues MKEKVKDTVRLGIEFSTFDGWVLLGLDGLGLRPLVQRHLAMGTRGGVWQIRCEPEGPAARCCAQCDGVEEIGVDEHVWRH TPFGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9576; Mature: 9576
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKVKDTVRLGIEFSTFDGWVLLGLDGLGLRPLVQRHLAMGTRGGVWQIRCEPEGPAAR CCCHHCHHHHHCEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHH CCAQCDGVEEIGVDEHVWRHTPFGSR HHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEKVKDTVRLGIEFSTFDGWVLLGLDGLGLRPLVQRHLAMGTRGGVWQIRCEPEGPAAR CCCHHCHHHHHCEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHH CCAQCDGVEEIGVDEHVWRHTPFGSR HHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA