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The map label for this gene is allC

Identifier: 213159097

GI number: 213159097

Start: 3926193

End: 3927203

Strand: Direct

Name: allC

Synonym: AB57_3807

Alternate gene names: 213159097

Gene position: 3926193-3927203 (Clockwise)

Preceding gene: 213159095

Following gene: 213159098

Centisome position: 96.93

GC content: 42.04

Gene sequence:

>1011_bases
ATGGCAACATTGCACGCTCCAGCTTTTGAACTTCCTGAAATTTTGAATACTAAAACCAATTTGGCAGATGCCCGAATTGG
TGCACAAGTGATTGAGTGTTCAGATGATTTCTTTGCAGAAGCAAAGCGTATGCTGCAATTTGAAGCACCTATTTTTGTTG
AAGATAAATTTGATGATCATGGCAAATGGATGGATGGTTGGGAGACGCGCCGTAAGCGTCATGCAGGCTATGACTGGTGT
ATTGTGAAACTAGGTGTGAGTGGAAAAATCAGTGCACTTGATATCGACACCACGTTTTTTACAGGAAATTATCCTGCATC
TGCATCATTAGAGGCATGTTATGCACCAAATGGTGACCTTACTGGGGTAACGTGGCAGAGTATTTTGGAAAATACAGAGC
TAGGGCCGAGTCAACATCATATTTTTATGGTCAATAATGATGCAATTTTCACGCATATACGCCTCAATATTTTCCCAGAT
GGTGGTGTTGCCCGTTTACGCGTTTATGGTGACGTTCATATTCAGGTGACCGACCACGAGCAGACTCTCGATTTATTGGC
CTTAGAAAATGGCGGTCGTGTAATTGCTTATAGCGATGCGCATTTTGGACATCCACGTAATTTGATTAACCCAGGCCGTG
GCGTCAACATGGGAGATGGGTGGGAAACCAAACGCCGCCGCGCACCAGGTTATGACTGGTGTATTCTTGCATTGGGTAAA
AGCGGAAAAATTGAAAAAATTGAAATTGATACGGCGCATTTTAAAGGTAACTTTCCTGCTGAAGTTTCTATTCAGGCGGT
CTACCTTGAAAATGCAACCGATGCACAGCTAATTCCACAAAGTATGTTTTGGTCTTACTTACTTGAAGCCCAACCTATGC
AAATGGACCATATTCATGAATATGTGAATGAGATTTTAAAGCATGAAAAAATCTCTCATATCCGTATTAATATGATTCCG
GATGGTGGTATTAGCCGTGTCCGTTTATGGGGAAAAATTGCCAAGTCATGA

Upstream 100 bases:

>100_bases
GCTTATATATTTATGTATAAAACTCATCTCAACACGCTTAGTGTGAGTGCAGTTTTAAATGAAAAATCATGTTTTTAACA
AGAAATACGGATACTCCATT

Downstream 100 bases:

>100_bases
TCATGAAGAATATTCAAATTCAGCCTTTAACCATTGAGAACTTTCAGCCCTTCGGAGAAGTCATTTGTTGTGACGGGCAT
GATTTTTTTCATATTAATGA

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDHGKWMDGWETRRKRHAGYDWC
IVKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDLTGVTWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPD
GGVARLRVYGDVHIQVTDHEQTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGK
SGKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHEYVNEILKHEKISHIRINMIP
DGGISRVRLWGKIAKS

Sequences:

>Translated_336_residues
MATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDHGKWMDGWETRRKRHAGYDWC
IVKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDLTGVTWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPD
GGVARLRVYGDVHIQVTDHEQTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGK
SGKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHEYVNEILKHEKISHIRINMIP
DGGISRVRLWGKIAKS
>Mature_335_residues
ATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDHGKWMDGWETRRKRHAGYDWCI
VKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDLTGVTWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPDG
GVARLRVYGDVHIQVTDHEQTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGKS
GKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHEYVNEILKHEKISHIRINMIPD
GGISRVRLWGKIAKS

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family

Homologues:

Organism=Homo sapiens, GI144953901, Length=364, Percent_Identity=35.7142857142857, Blast_Score=241, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6322220, Length=329, Percent_Identity=41.3373860182371, Blast_Score=248, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALLC_ACIB3 (B7GV54)

Other databases:

- EMBL:   CP001172
- RefSeq:   YP_002324067.1
- ProteinModelPortal:   B7GV54
- SMR:   B7GV54
- GeneID:   7059158
- GenomeReviews:   CP001172_GR
- KEGG:   abb:ABBFA_000126
- HOGENOM:   HBG480577
- OMA:   NSHHYHE
- ProtClustDB:   PRK13257
- HAMAP:   MF_00813
- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979
- PANTHER:   PTHR12045
- PIRSF:   PIRSF016516
- TIGRFAMs:   TIGR02961

Pfam domain/function: PF03561 Allantoicase; SSF49785 Gal_bind_like

EC number: =3.5.3.4

Molecular weight: Translated: 37829; Mature: 37698

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDH
CCCCCCCCHHCHHHHCCCCCCHHHHHCCEEEECCHHHHHHHHHHEEECCCEEEECCCCCC
GKWMDGWETRRKRHAGYDWCIVKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDL
CCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCC
TGVTWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPDGGVARLRVYGDVHIQVTDHE
CCCCHHHHHCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEEEEEEECCC
QTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGK
CCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECC
SGKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHE
CCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCHHHCHHHHHHHHHHCCCCCCHHHHHH
YVNEILKHEKISHIRINMIPDGGISRVRLWGKIAKS
HHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEHHCC
>Mature Secondary Structure 
ATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDH
CCCCCCCHHCHHHHCCCCCCHHHHHCCEEEECCHHHHHHHHHHEEECCCEEEECCCCCC
GKWMDGWETRRKRHAGYDWCIVKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDL
CCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCC
TGVTWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPDGGVARLRVYGDVHIQVTDHE
CCCCHHHHHCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEEEEEEECCC
QTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGK
CCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECC
SGKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHE
CCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCHHHCHHHHHHHHHHCCCCCCHHHHHH
YVNEILKHEKISHIRINMIPDGGISRVRLWGKIAKS
HHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA