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The map label for this gene is yajR [H]

Identifier: 213159027

GI number: 213159027

Start: 3845961

End: 3847322

Strand: Reverse

Name: yajR [H]

Synonym: AB57_3735

Alternate gene names: 213159027

Gene position: 3847322-3845961 (Counterclockwise)

Preceding gene: 213159028

Following gene: 213159026

Centisome position: 94.98

GC content: 42.88

Gene sequence:

>1362_bases
ATGAATGCTTTGGAACGTCGCTCAACTTTTGCCTTAAGTAGTATTTTTGCGCTACGCATGTTGGGCTTGTTCATGATTAT
TCCTGTCTTTTCTGTAGTTGGGCAGTCATATCAATATGCGACTCCAGCACTCATTGGTTTGGCTGTAGGTATTTATGGTT
TAAGTCAGGCCATTTTACAAATTCCATTTAGCTTACTTGCTGACCGTTTTAGCCGTAAACCGCTTGTGGTCTTTGGTCTA
TTGCTCTTTGCTATTGGTGGTGCAATTGCCGGACTATCTGACACCATTTATGGCGTGATTATTGGCCGTGCTATCGCTGG
GGCGGGTGCAGTTTCGGCAGTAGTTATGGCACTTTTAGCCGATGTGACGCGTGAAGAGCAGCGTACTAAAGCCATGGCTG
CCATGGGCATGAGTATTGGCTTATCTTTTGTAGTCGCTTTTAGTCTTGGGCCTTGGCTCACAAGCCTTGTAGGTATTTCT
GGTTTGTTCTTTGTGACAACCATCATGGGTTTGATCGCGATTGCGATGTTATTGCTGGTGCCTAAAGTTACTCGTCACCA
TCGTAATTATCAGCAAGGCTACATGGCACAGCTTAAGCAAGTCATTCAAATGGGTGATTTAAACCGTTTACACGTTTCGG
TTTTTGCATTGCATTTATTGCTGACTGCCATGTTTATTTATGTGCCGTCACAGCTTATTGAGTTTGCGCGTATTCCTTTG
GCGAGCCACGGTTTGGTGTATTTGCCACTTTTGGTTATTAGTCTGTTTTTTGCATTTCCTAGCATTATCATTGCTGAAAA
ATATCGCAAAATGCGCGGCATTTTCTTAACAGCAATTACAGGCATTATTGCAGGTTTGCTTCTTCTTATATTTGGTTATC
AATCAAAATATGTATTACTCGCTGGCTTAGGAATTTTCTTTATTGCCTTTAATGTCATGGAGGCTTTATTACCTTCTTGG
CTGTCAAAATCCGCTCCAATCCAGTCGAAAGCCACCGCTATGGGGGTAAATGCCAGTAGCCAGTTCTTAGGTGCCTTTTT
TGGTGGCACACTAGGTGGTCAATTATTGATGTTACATAATACTGCGATTGGATGGAGTGTCTTAGCAGGGATTGCTATAA
TATGGCTGCTAATTAGTTTTGGTTTAGCTCAGCCGCGGTATTTGTCATCTATTGTGCTGCCATTGCCGCAAGTGCAACAG
GTGAATGAGTGGACCACACAACTATTAGCAATTCGTGGTATCGAAGAAGTTGTGGTGATGCCTGACCAGCAAGTTGCTTA
TATTAAAGTCGATAAACAGTCTCTTGATGACGCTTCGCGACGTGATTTAACGCAGTTGTTCGGTAAAGAGGTAGCCATTT
AA

Upstream 100 bases:

>100_bases
ATTTTTTTAAGCCCAAATCGTTATTTTAAATAAGGTGTCCCGTATTTTTAGAAACGAATCGGCTTATAATTTACTTAGTT
TGATAACGTGTATTGATATG

Downstream 100 bases:

>100_bases
GCATAACTCTTATAAAGTAAAACATAGAAATGTATAGGATGAAGACAGCTAATGCGTGGTGTAAATAAGGTTATTTTGGT
TGGTACTTTGGGTCGTGATC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNALERRSTFALSSIFALRMLGLFMIIPVFSVVGQSYQYATPALIGLAVGIYGLSQAILQIPFSLLADRFSRKPLVVFGL
LLFAIGGAIAGLSDTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSLGPWLTSLVGIS
GLFFVTTIMGLIAIAMLLLVPKVTRHHRNYQQGYMAQLKQVIQMGDLNRLHVSVFALHLLLTAMFIYVPSQLIEFARIPL
ASHGLVYLPLLVISLFFAFPSIIIAEKYRKMRGIFLTAITGIIAGLLLLIFGYQSKYVLLAGLGIFFIAFNVMEALLPSW
LSKSAPIQSKATAMGVNASSQFLGAFFGGTLGGQLLMLHNTAIGWSVLAGIAIIWLLISFGLAQPRYLSSIVLPLPQVQQ
VNEWTTQLLAIRGIEEVVVMPDQQVAYIKVDKQSLDDASRRDLTQLFGKEVAI

Sequences:

>Translated_453_residues
MNALERRSTFALSSIFALRMLGLFMIIPVFSVVGQSYQYATPALIGLAVGIYGLSQAILQIPFSLLADRFSRKPLVVFGL
LLFAIGGAIAGLSDTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSLGPWLTSLVGIS
GLFFVTTIMGLIAIAMLLLVPKVTRHHRNYQQGYMAQLKQVIQMGDLNRLHVSVFALHLLLTAMFIYVPSQLIEFARIPL
ASHGLVYLPLLVISLFFAFPSIIIAEKYRKMRGIFLTAITGIIAGLLLLIFGYQSKYVLLAGLGIFFIAFNVMEALLPSW
LSKSAPIQSKATAMGVNASSQFLGAFFGGTLGGQLLMLHNTAIGWSVLAGIAIIWLLISFGLAQPRYLSSIVLPLPQVQQ
VNEWTTQLLAIRGIEEVVVMPDQQVAYIKVDKQSLDDASRRDLTQLFGKEVAI
>Mature_453_residues
MNALERRSTFALSSIFALRMLGLFMIIPVFSVVGQSYQYATPALIGLAVGIYGLSQAILQIPFSLLADRFSRKPLVVFGL
LLFAIGGAIAGLSDTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSLGPWLTSLVGIS
GLFFVTTIMGLIAIAMLLLVPKVTRHHRNYQQGYMAQLKQVIQMGDLNRLHVSVFALHLLLTAMFIYVPSQLIEFARIPL
ASHGLVYLPLLVISLFFAFPSIIIAEKYRKMRGIFLTAITGIIAGLLLLIFGYQSKYVLLAGLGIFFIAFNVMEALLPSW
LSKSAPIQSKATAMGVNASSQFLGAFFGGTLGGQLLMLHNTAIGWSVLAGIAIIWLLISFGLAQPRYLSSIVLPLPQVQQ
VNEWTTQLLAIRGIEEVVVMPDQQVAYIKVDKQSLDDASRRDLTQLFGKEVAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=436, Percent_Identity=41.9724770642202, Blast_Score=333, Evalue=1e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49107; Mature: 49107

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALERRSTFALSSIFALRMLGLFMIIPVFSVVGQSYQYATPALIGLAVGIYGLSQAILQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IPFSLLADRFSRKPLVVFGLLLFAIGGAIAGLSDTIYGVIIGRAIAGAGAVSAVVMALLA
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DVTREEQRTKAMAAMGMSIGLSFVVAFSLGPWLTSLVGISGLFFVTTIMGLIAIAMLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKVTRHHRNYQQGYMAQLKQVIQMGDLNRLHVSVFALHLLLTAMFIYVPSQLIEFARIPL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASHGLVYLPLLVISLFFAFPSIIIAEKYRKMRGIFLTAITGIIAGLLLLIFGYQSKYVLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AGLGIFFIAFNVMEALLPSWLSKSAPIQSKATAMGVNASSQFLGAFFGGTLGGQLLMLHN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEC
TAIGWSVLAGIAIIWLLISFGLAQPRYLSSIVLPLPQVQQVNEWTTQLLAIRGIEEVVVM
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEC
PDQQVAYIKVDKQSLDDASRRDLTQLFGKEVAI
CCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]